Gene Veis_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4754 
Symbol 
ID4694622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5245296 
End bp5246090 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID639852496 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999466 
Protein GI121611659 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC GCAACACCGC GCTGTGGCGC TTTCCCGGGC TGGGATTGAA CTTCGGCATC 
GCATTGGTCT TTTTGTACCT GCCGATCGTG CTGCTGGTGC TGCTGTCGTT CAATGAAAAC
AACGTGGCCA CCCTGTGGAC CGGTTTGTCC CTGCGCTGGT ACGGCATTGT CTTTGACAAC
CCGAACATCC TGCGGGCGGC CGGAAACTCG ATGCTGGTGG CATGTGTCGC CACCGTCGTC
TCCACGGTCT TCGCCGGCAT GGCCGCGCTG GCCATGGCGC GCCGGAATTT CAAGGGCCAG
AACGTGATCA GCGGCATGTT GGGGCTGCCG TTGCTGGTGC CGGAAATCGT CACTGCCGTG
GCATCGCTGC TGTTTTTTCT GTCCTTGGGC ATGGATTTGG GGCTGCGCAC GGTGACGATA
GCGCACATCG TGTTTTGCAT TCCGTTCGCT TACCTGCCGA TACGGGCGCG GCTGGCGAAC
ATGGACCCGC GGCTGGTCGA GGCGGCGGCA GATCTGTACG CATCCCCCGG GCAGGCATTC
CGCCGGATCA CCCTGCCCTT GTTGATGCCG GGCATCATCA GCGGCGCGAT GCTGGCATTC
ATCGTGTCGC TGGATGACTT CGTCATCACC TTCTTTGTCG CCGGCCCCGG CGCCACCACA
TTGCCGGTCT ACATCTTTGG CATGGTGCGC ATGGGGATCA CGCCGGAAGT CAACGCCCTG
GCGGCCTTGC TGCTGATCGC ATCCATGGTG TTTGTCGGTC TTTCGTGGTG GATTGGCCAG
CGCGACCGCC GTTGA
 
Protein sequence
MTHRNTALWR FPGLGLNFGI ALVFLYLPIV LLVLLSFNEN NVATLWTGLS LRWYGIVFDN 
PNILRAAGNS MLVACVATVV STVFAGMAAL AMARRNFKGQ NVISGMLGLP LLVPEIVTAV
ASLLFFLSLG MDLGLRTVTI AHIVFCIPFA YLPIRARLAN MDPRLVEAAA DLYASPGQAF
RRITLPLLMP GIISGAMLAF IVSLDDFVIT FFVAGPGATT LPVYIFGMVR MGITPEVNAL
AALLLIASMV FVGLSWWIGQ RDRR