| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3899 |
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| Symbol | |
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| ID | 4693565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4289543 |
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| End bp | 4290475 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639851646 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_998624 |
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| Protein GI | 121610817 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0299116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGC CCACTTTCCC GATTGCCTTG TTCGACGCCC CGGCGATACA GCGCGTCGCG
GGCATGTACG CGGCTTTGCC GCGCTCGCAA CAGCGCATTG CTGATTACGT GTTGCGCCAC
GCCTTCGATG TGGCAACGGC ATCCATCGAA GAGCTGGCGC AGGCCGCCAA GGTGTCGATC
GCTACGGCCA ACCGGTTTGC ACGGGCGCTC GGCTACAGCA GCTATCCTGA TTTCCGGGCC
GATCTTTTGC AGGTCTTCAA GACCGCCTTG GAGCCGGTCG AAAAACTGCG CGACATCAAG
CCCGGCACCC GTTTGCACGA CACCCTTTTG GCCGTGATTG CCCAGTCTGT CGACAATCTT
CAGGCGACAC GCAGCATGTC GAATGCAGAC GCGCATGAGC ACTTTGTGCT CGCGTTACGC
CAATCGGAGC GGGTCTACAT CGTCGGCTTC GGCAGCAGCG CGTTTCTGGC CAGTTCCGCC
GCCTACCACC TTGGTCTGTA TTGTCCCAAC GTTCACTCCA TCGGCGGCGA AGGCGGGGCG
GAGCAGGCCG TGCGTCGAAT GAACCAATTG ACTGCCCAGG ATCTGGTCTT TGGCATTTCG
TTTCCGCGCT ATTCGGCCGA CACGGTGCGT CTGCTCCATT TCGCGCAACA GCGTGGCGCG
GTGGTCGCTG CCCTGACTGA CGCGCCAACG TCACCGCTCG TGCAACTGGC GCAGCATGTG
CTCTATGCCA AGGCCAACAG CGCTTTGCTA TCGAGCTCCA ACGTGGCCGC ACTGACCGTG
CTGGAAGCGC TGGGGGCCAT GCTGGCGCAA GGTCAGAGCA ACGCTCTTGC GCAAGCGCGC
GACTTGGCCG AGCAGTTGAT GCCCTATTTT TACTTCGGTC GCGCCGATGC GCAGCGCATC
ACACCGGCGG CCAGCAGCAA GCGCAAGCAG TAA
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| Protein sequence | MDQPTFPIAL FDAPAIQRVA GMYAALPRSQ QRIADYVLRH AFDVATASIE ELAQAAKVSI
ATANRFARAL GYSSYPDFRA DLLQVFKTAL EPVEKLRDIK PGTRLHDTLL AVIAQSVDNL
QATRSMSNAD AHEHFVLALR QSERVYIVGF GSSAFLASSA AYHLGLYCPN VHSIGGEGGA
EQAVRRMNQL TAQDLVFGIS FPRYSADTVR LLHFAQQRGA VVAALTDAPT SPLVQLAQHV
LYAKANSALL SSSNVAALTV LEALGAMLAQ GQSNALAQAR DLAEQLMPYF YFGRADAQRI
TPAASSKRKQ
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