Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3696 |
Symbol | |
ID | 4694612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4087935 |
End bp | 4088753 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639851451 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_998429 |
Protein GI | 121610622 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.831321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC GCACCTTCGC CATCACTGCA TCTGTTCTGG CTGGCAGCGC CCTGGCGCAG GCCGCGCCCG AGAGCGAAAT CTCCGTGCCG ATCCCCGGAA ATCTCGATCC GCGCATCGTG ACGTTCGCCT ATACGCCCGA TGTGGTCTAT CAACTGCCGG TGACGGTGGG CATGCACACC CACATTCCTT TCACGGCCGA TGAAGAGCTG TCGGAGCCGC CCTCGATCGG CGAGAAGGTG CGCTGGCGGC TCGAAGGCAA TGAGAAGAAC ATCTACATCA AGGCGCTGCA GCCGGGGGTG CGCACCTCCC TGACGCTGGT CACCAACAAG CGGACATACC AGTTCGAGCT GATCGCCACG ACAAAGCCGA ACGAGCGCAT CCAGAAGGCG CAGTTCACCT ACCCCGATGA GCAAGCCGGC ATCCAGATGG CCTGGCGCAA CAAGACCGAG CGTGCCGCCG AGCAAGCCGC GCAGATCGAG CGCCACCGCA AGGCGCAGAA CCTGTCGGAC GCCCCCATGG ACGCCAGCCA ACTGGCGTTC TATTCGGTGC GCACGGACAA CACGCAGTAC CAGCGCATGC ATGTCTATTC CGATGGCGTC AAGACCTGGA TGCGGCTGCC CCCGGGAGTG CAGGACCTTC CGGCGGTTTT CATGGTGGAC AAGGACCAGC GCGGCCGTGA GCAACTGATG CCGGTGAACT ACACGGTTGC CGATCGCGAA AACCTGCGCG ACCGGGACGT GATCATCATC GACCGTACGG CAGCGCTGTG GATGCTGCGC ATCGGCCAGT CCATCGAGGT CCGTGTGGCA CGCGATTGA
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Protein sequence | MKLRTFAITA SVLAGSALAQ AAPESEISVP IPGNLDPRIV TFAYTPDVVY QLPVTVGMHT HIPFTADEEL SEPPSIGEKV RWRLEGNEKN IYIKALQPGV RTSLTLVTNK RTYQFELIAT TKPNERIQKA QFTYPDEQAG IQMAWRNKTE RAAEQAAQIE RHRKAQNLSD APMDASQLAF YSVRTDNTQY QRMHVYSDGV KTWMRLPPGV QDLPAVFMVD KDQRGREQLM PVNYTVADRE NLRDRDVIII DRTAALWMLR IGQSIEVRVA RD
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