Gene Veis_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3576 
Symbol 
ID4690704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3953817 
End bp3954938 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID639851331 
ProductABC transporter related 
Protein accessionYP_998312 
Protein GI121610505 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0465993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.938482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC TCGATTTGAT CCAAATCCAC AAGAGTTTCG GCCCGGTCAA GATTCTTCAT 
GACATCTCGA TCGCTCTGCA GGACGGTGAA TTCCTGGTGC TGATCGGCCC TTCGGGCTGC
GGCAAGAGCA CCTTGATGAA CATCATTGCC GGTCTGGAAG AGCCGAGCGG CGGCAGCCTG
AAACTGGACC AGCGCGACAT CACCCATCTG GGCCCGGCGG ACCGCAACAT CTCGATGGTG
TTCCAGTCCT ATGCGCTGTA CCCGAACATG ACGGTCGCCA GGAACATCGA ATTCCCGCTG
CGGATGCGCA AGGTGGCCAG GGAGCAGCGC CAGGAGCGCG TCCAATCGGT TGCCCGGATG
CTGCAGATCG AGCATCTTCT GGAGCGCAAG CCGCGCCAGC TCTCCGGCGG GCAGCGCCAG
CGGGTGGCCA TCGGCCGGGC CTTGGCGCGC GAGCCGCAGT TGTATCTGTT CGACGAGCCG
CTGTCGAATC TCGACGCCCA GTTGCGCGTG GGCATGCGCA CCGAAATCAA GAAACTGCAC
CAGCGGCTGA AAGCCACCAT CGTCTATGTG ACGCATGACC AGATCGAAGC CATGACGCTG
GCCACGCGGA TTGCGGTGAT GAAGGGCGGG CGGCTCCAGC AGTTGGGAAC CCCGGCCGAG
GTCTACCACC AGCCCGCGAA CGCCTTTGTC GCCGGTTTCA TGGGCGCTCC CCGGATGAAT
CTGCTGCAAG GGCATTTGCA GGCCAGCGGC ACCGGGCTGT CCATCGTGCT CGGCCAAGGC
GCGCAAGGGG CCGCAGCCAT CGCCGTGCCG CCGGCGCTGG CGACGCCCGC GCTGTCTGGC
TACATCGGCC GGCCCATCAT TGCCGGCATC CGCCCCGAGG CGGTCACGCT GGTCGGGCCG
GATGCGGTGC CAGGCCCGCT GCAAGCCTGC GTTCAAGCGC AGGTGGAAGT GATCGAGCCC
ACCGGCGCCG ATACGCTGGC GCTGCTCGAT CTTGGCGGGC AGGAGTTCAC CGTGCGCCTG
GAGCCCGATG TCCGGCTCGA TGCGCTCCAG AGCGCCCACT TCCTGATCGA CCTGCGCCGG
CTGGTCTGTT TCGACGCGCA GTCCGAAGAG CGGATCGCCT GA
 
Protein sequence
MAALDLIQIH KSFGPVKILH DISIALQDGE FLVLIGPSGC GKSTLMNIIA GLEEPSGGSL 
KLDQRDITHL GPADRNISMV FQSYALYPNM TVARNIEFPL RMRKVAREQR QERVQSVARM
LQIEHLLERK PRQLSGGQRQ RVAIGRALAR EPQLYLFDEP LSNLDAQLRV GMRTEIKKLH
QRLKATIVYV THDQIEAMTL ATRIAVMKGG RLQQLGTPAE VYHQPANAFV AGFMGAPRMN
LLQGHLQASG TGLSIVLGQG AQGAAAIAVP PALATPALSG YIGRPIIAGI RPEAVTLVGP
DAVPGPLQAC VQAQVEVIEP TGADTLALLD LGGQEFTVRL EPDVRLDALQ SAHFLIDLRR
LVCFDAQSEE RIA