| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3420 |
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| Symbol | |
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| ID | 4691599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 3791458 |
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| End bp | 3792777 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639851177 |
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| Product | regulatory protein, DeoR |
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| Protein accession | YP_998159 |
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| Protein GI | 121610352 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.382426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCG CAGACCGACA TCTGATCCGT GACGCGACAC TGGTGTCGCG TCACGGATCA
GATGTCGTAG GCTGCGCGCA GCCATCGGAG CGCAGCGCAA GGCGCATCGC GCAGCCAATA
CCGAGCGTAT TGGCAAGCGA TGCAACGCCG CGATGTGCTT CGATGGCCAG CGCAGACCGA
CAGATGATCG GTGACGCGAC ACCAGGCGCT TTCGCCTGCG ACCACCCGCT TTGTGGAATG
TCTCCAGGCC GTGGTCAAAA GCTCTCTGGC CACCGTCTGC AAATACGCAA CGGATGCGCT
TGCCGGCGGA TGCACCGGGG GCGCTTGGGG CTGTGGTGTT CTTTGCGGCA GCGCCGTCGC
CTTGCGCCAT GCGCTCGCCC AGTGCCGCGC TCAGTGCGCT CAGTGCGCTC AGTATTAACC
CCGACGGCAT CTTGCTTGAC GCGATGGCTG TTCACGCCGA CACTTTCGAT TGGAAAGAGA
TGTCTTTCCA ATCGAAAGAC CGGAGATATG CAAGACCATG GCAGTAGCCC GCTCAAACGC
AGGCTTCAGA TCGTTGATCT CGCGCGCAAA TCCGACGCGG TGAAGGTCGA AGCGCTCAGC
GCGCTGTTCG GGGTTTCCAC GGTCACCATC CGCAACGACC TGAACTACCT TGAGCAGCAG
GGCTATGTGG TGCGCACATT CGGGCGCGCG CGCTACAACC CGGCGCTGCT CAACGCCGTG
CCACAGCCGC AGGAGAGCCG GGCAACGCCC GCCGCTCCGC TGCTGAGCTT GGTCGCTGGC
GCCGCGCTGC ACTGGATCGC CGACGGGATG GCGCTGTTTC TCGGTGGCGG GGCCTTGGTG
CACCGGCTGC TGCCGCAGTT GGTGGGCAAG CCGGGCCTGG CGCTGACGCT GCACGACCTG
TCGATGGTCG CCACGGCCCG GCAGTTTCTG AGCTGCGAGA TCCATGTGAC GGGCGGCGCG
CACAGCGATG ACGAGCCGGG TCTGATCGGG CCGGCTGCCG AACTGGGGTT GCGCTCACAC
CCGGTGGATT TGTGTGTGAT CGAAGTCAGC GGCATCGACG CGCGCGGCCG CATCCTGTCG
CAGTTTGCCG GTGCGGCGCG CCTGTACGCA GCGGCGGTCG GTCACTGCTC GAAGGCGATC
AGCCTGGCGC GCGGGCTCGA TGCCGGTGCG GGCTTCGGGC ACCCGGTGTG CGGCGTGGGC
GAGCTCGATG CGTTCGTCGT CCACCACGAC ATCGAAGCGG GCGTCTTCGA TCTGTTGGCC
GAGCATCAGC TGCGGGTCGA TCGAAAGGCT GGCGGTGTGC TCGAATTTCG CAAAGCCTGA
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| Protein sequence | MASADRHLIR DATLVSRHGS DVVGCAQPSE RSARRIAQPI PSVLASDATP RCASMASADR
QMIGDATPGA FACDHPLCGM SPGRGQKLSG HRLQIRNGCA CRRMHRGRLG LWCSLRQRRR
LAPCARPVPR SVRSVRSVLT PTASCLTRWL FTPTLSIGKR CLSNRKTGDM QDHGSSPLKR
RLQIVDLARK SDAVKVEALS ALFGVSTVTI RNDLNYLEQQ GYVVRTFGRA RYNPALLNAV
PQPQESRATP AAPLLSLVAG AALHWIADGM ALFLGGGALV HRLLPQLVGK PGLALTLHDL
SMVATARQFL SCEIHVTGGA HSDDEPGLIG PAAELGLRSH PVDLCVIEVS GIDARGRILS
QFAGAARLYA AAVGHCSKAI SLARGLDAGA GFGHPVCGVG ELDAFVVHHD IEAGVFDLLA
EHQLRVDRKA GGVLEFRKA
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