| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3303 |
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| Symbol | |
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| ID | 4691635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3685975 |
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| End bp | 3686643 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639851066 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_998051 |
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| Protein GI | 121610244 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.248413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACACTG AAACCATCCG CACCTTGATC GTTGACGACC ATGCCGTGGT GCGTTCGGGC
TACCGCAGCT ATCTGGAGCA GGTGCCCGGT TTCCAGGTGG TGGCGGAGGC CGATTGCGCC
AACGAGGCCT ACGCACAGTA CAAACGGATG CACCCGGATG TGGTGATCAT GGACATCATG
CTGCAAGGCG CCAGCGGTAT CGATGCCAGC CGCAGGATAT TGTCGAACCA TCCGGGGGCG
AAGATTCTCA TCTTCTCGAT GTATGTCAGC CCGGTATTGC TGCAGCAGGC GCTCAATGTC
GGGGTGCTTG GCGCTGTCGG CAAACAATGC GATCCCGACA CCCTGCGTGA AGCGGCGATT
GCCGTGGCCG GCGGCGATCG ATATCTCGAC GCGAGCATGG CGCAGTCGCT GGTATTTTCC
AGATACGATC GCGGCCAGAA GATTTTCGAT GCACTCTCAC CGCGCGAGTT CGAGATATTC
CTGCTGCTGA TTTCCGGCGC GCCGGTCAAG GAAATCGCGC AAGCGCTCAA CCTGAGCGCA
AAAACCGTCG CCAACCGGGC CAGCATGATT CGCCAGAAGC TCGGCGTGTC ATCGGACATC
CAACTCGTCA AACTGGCCGT TGCCGCCGAT ATCGTACCCT GGATCCGGCC CGATCGGGCG
ACGAGCTGA
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| Protein sequence | MNTETIRTLI VDDHAVVRSG YRSYLEQVPG FQVVAEADCA NEAYAQYKRM HPDVVIMDIM
LQGASGIDAS RRILSNHPGA KILIFSMYVS PVLLQQALNV GVLGAVGKQC DPDTLREAAI
AVAGGDRYLD ASMAQSLVFS RYDRGQKIFD ALSPREFEIF LLLISGAPVK EIAQALNLSA
KTVANRASMI RQKLGVSSDI QLVKLAVAAD IVPWIRPDRA TS
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