| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3202 |
|---|
| Symbol | |
|---|
| ID | 4690908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 3570756 |
|---|
| End bp | 3571502 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639850965 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_997950 |
|---|
| Protein GI | 121610143 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.709226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAT TGAATCCGCT GGCGCTGAGC GTGTCCGACC TCGTCGTGCG TCGCGGCAAC
GCGGTCGTGG TCGCCGGCGT GTCCTTCGGC GTTGCCCATG GCGGCAGCCT GGGCATCGTG
GGCGAATCGG GCTGCGGCAA GAGCACCATC TTGCGCGCCA TCGCCGGCAT CGACACCGGC
TGGCAAGGCC GCATCGCGGC CCTGGGGCAG CCCATCGGCC ACCGGCGCAG CCTGGCCGAC
CGCCGCGCCA TGCAGATGGT TTTCCAGGAC CCGCTGGCCG CGCTCAACCC GGCGCACACC
GTCGACGAGG CCCTGCGCGA GCCGTTGCTG GTGCATCGCA TGGACGACCA CGAGCGGCGT
GTCGCCGAAG CCTTGCGCAC GGTGGCGCTG CCGCCGGCGG TGCGCTTTCG TTTTCCCGGC
CAACTCTCCG GCGGCCAGCG CCAGCGGGTG TGCATTGCGC GCGCGCTGCT GGTCCAGCCG
AAGGTGCTGC TGCTCGACGA GCCGACCTCG GCGCTCGATG TGTCGGTGCA GGCCGAAGTG
CTGAACCTGC TCTCGCGCCT GCGCCGCGAG CATCGGCAGG CATTCGTGCT GGTGAGCCAC
GACCTGGGCG TGGTGGCGCA CATGTGCGAT CACATCGCCT TCATGGCCGG CGGGCGCTTC
GTCGAGATGC TGACGCGCGC GGAGCTTGTC GCGCGCCAGG TGCGCTCCGA CGCGGCGCGC
CAACTGCTGG CCGCGTCCGG CGCGTAG
|
|---|
| Protein sequence | MAALNPLALS VSDLVVRRGN AVVVAGVSFG VAHGGSLGIV GESGCGKSTI LRAIAGIDTG
WQGRIAALGQ PIGHRRSLAD RRAMQMVFQD PLAALNPAHT VDEALREPLL VHRMDDHERR
VAEALRTVAL PPAVRFRFPG QLSGGQRQRV CIARALLVQP KVLLLDEPTS ALDVSVQAEV
LNLLSRLRRE HRQAFVLVSH DLGVVAHMCD HIAFMAGGRF VEMLTRAELV ARQVRSDAAR
QLLAASGA
|
|---|
| |