Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2978 |
Symbol | |
ID | 4692127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3325579 |
End bp | 3327198 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639850737 |
Product | alkaline phosphatase |
Protein accession | YP_997730 |
Protein GI | 121609923 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.388387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGCTG ACCGTCCCAC ACCCGAATCC CGCCGTCAAT TCCTGCGCCA GGCCACGCTC GGCACCGGCG GCGCCCTGCT GGCGGCAGGT CCATTGTCCA GCGTGCTCGC GCAGCAACAG GCGCCGGCCG TCATCACGGC CGAGCGCCTG CGGCCGCAGG TGCGCAGTGG CGCGATGAGC GGCGACACCA CGCGCGACGC AGCCATGCTC TGGAGCCAGA CCGACCGCGT TGCGCGCATG GTGGTGGAGT ATTCGGCCCA CGAGAATTTC AAGAACGCGC AAACCATCAC CGGCCCGCTC GCGCTGGCGC GCAACGACTA CACCGCGCGC GTCGATTTGC GCGGCTTGCC GGTGGCGCAG CGGCTGTACT ACCGCGTGCG TTTTCAGGAT CTGCAGCACA AGTCGGCCTG GAGCGAGCCG GTGACCGGCA GCCTGATCAT CGCGGGCGGC AGCGGGCGCG ACATCAGCTT TGCGTTTTCG GGCGACGAGG CCGGACAGGG CTGGGGCATC AACGAAGCCT GGGGCGGCTA TCGCGTGTAC GAAACGATGC GCCGTTTCCA GCCCGATTTC TTCATCCACT CGGGCGACCA GATCTATGCC GATGGCCCGA TACAGGCCGA GGTGACACTC GACGACGGCA GCATCTGGCG CAATCTGGTG ACGCCTGCCA AGGCGAAAGT GGCCGAGACG CTCGACGATT TTCGCGGCAA CTTCGCCTAC AACCTGCTGG ATGCGAACAA AAAGAGATTC ATGGCCGAAG TGCCCTTCCT GGTGCAATGG GATGACCACG AAGTGCGCAA CAACTGGTGT CCCGACCAAC GCATTGACGC GGCGGACAAG CGCTACCAAG AGCGCGATTT GAATCTGCTG ATGCAGCGCG CGCGCCAGGC CATGTTCGAG TACAACCCGT TTCGCATCGA CAGCGCCGAT CCGCAGCGCA TCTATCGCTC TTTCGACTAC GGCCCCTTGC TGGAGGTGTT CATGCTCGAC GAGCGCAGCT ACCGCAGCGC CAACTCAGCC AACGCCCAAG ACCGGCAAGG CGCAGATACC GCTTTCCTCG GCACGGCGCA AATGCGCTGG CTCAAACAGT CGCTGCGGCG CTCGCGCTCG ACATGGAAAG TGATCGCCAG CGACATGCCG CTGTCGATCG TCGTTCCCGA CCTGAACCCG GGTGTGCCGC CAGACACTTA CGAAGCCTGG GCCAACGGCG AGCACGGCAT GCCCCTGGGC CGCGAACTGG AAGTGGCTCG ACTGCTGCGC TTCATCAAGC ACCACCAGAT CAGGAATGTG GTGTGGGTGA CCGCCGATGT GCACTATGCG TCGGCGACTC ATTACACGCC GCAGAAGGCG CGCTTTACCG ACTTCGAGCC GTTTTGGGAG TTTGTCGGCG GGCCGCTGCA TGCCGGCTCT TTCGGCCCGG GCAAGATCGA CCGGACATTC GGTCCGGATG TGCGCCATGT CAGCATCCCG ATGGACATGA AGCAAAACCG TCCGCCCACC GAATTGCACC AGTTCTTCGG CATCGGCAAG ATCGATGCCA AGACCAAAGC CATGACGGTG TCCCTGCACA ATGTCGAGGG CAACAAACTG TATGGCGTGG AGCTTGCGCC GCAAGCCTGA
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Protein sequence | MPADRPTPES RRQFLRQATL GTGGALLAAG PLSSVLAQQQ APAVITAERL RPQVRSGAMS GDTTRDAAML WSQTDRVARM VVEYSAHENF KNAQTITGPL ALARNDYTAR VDLRGLPVAQ RLYYRVRFQD LQHKSAWSEP VTGSLIIAGG SGRDISFAFS GDEAGQGWGI NEAWGGYRVY ETMRRFQPDF FIHSGDQIYA DGPIQAEVTL DDGSIWRNLV TPAKAKVAET LDDFRGNFAY NLLDANKKRF MAEVPFLVQW DDHEVRNNWC PDQRIDAADK RYQERDLNLL MQRARQAMFE YNPFRIDSAD PQRIYRSFDY GPLLEVFMLD ERSYRSANSA NAQDRQGADT AFLGTAQMRW LKQSLRRSRS TWKVIASDMP LSIVVPDLNP GVPPDTYEAW ANGEHGMPLG RELEVARLLR FIKHHQIRNV VWVTADVHYA SATHYTPQKA RFTDFEPFWE FVGGPLHAGS FGPGKIDRTF GPDVRHVSIP MDMKQNRPPT ELHQFFGIGK IDAKTKAMTV SLHNVEGNKL YGVELAPQA
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