Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2936 |
Symbol | |
ID | 4690489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3287265 |
End bp | 3288875 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639850697 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_997690 |
Protein GI | 121609883 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.098527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCC CGAAATACCT CGGCGACTTC GCCGTCCTGA CGCCGGACAA GCCGGCCGTC ATCAACGGCA CCACTGGCGC GAGCCTGAGC TACCGCGAAC TGGAGGAGCG CTCCAACCGG TTCGCGCAAT ACCTGTATGC GCTCGGCCTG CGGCGCGGCG AGCGCATTGC GATGCTGCTC GAGAACCATC TGCGCTGCTT CGAGGTGGCG TGGGCGGCAT TCCGTTCGGG CCTGTTGCTG ACGGCGGTCA ACCGCTACCT GACCGCCGAC GAGGCGGCCT ACATCATCAC GGACAGCGAT GCGCGCGTCG TCGTTTCCTC GTTCGCGATG CGCGCTTTGG CGGCGCAGCT CAGTTGCGCC ATGCCCGCTT GCGAGCGCCG CCTGATGCTC GACGGAACGA TCCCGGGCTG GGACAGCTAC GAGCAGGCCA TTGCCGCCGC ATCCGCTGCG CGCCTGGCCG ACGAGTGGCT CGGCGCCACC ATGTTCTACA GTTCCGGCAC CACTGGCCGT CCCAAGGGCG TGGTGCGCGC GCAAAGGGCC TGCCGGATCG ATGAGGCCCC GGACCTGGAC ACACGCATGG CGATGATGCG CCACTACCTG TTCACGGCCG AATCGATATA CCTCTCGCCG GCGCCGCTGT ACCACGCGGC ACCGCTGAAC TACACGACCA ACGTGCAGTT TTGCGGCGGC ACGGTGGTCT TCATGGAGAA ATTCGAGCCG ATGCCGGCGC TGGCGCTGAT CGATCGCTAC CGCATCACCC ACAGCCAATG GGTGCCGACG ATGTTCATCC GGCTGCTCAA GCTCTCACCC GGACAGCGCG CCGGATTCGA TCTGCGCAGC CACCGCGTCG CCATCCACGC AGCCGCGCCC TGTCCGGTGG AAGTCAAACG CCAGATGATC GAATGGTGGG GCCCGATCGT GCACGAGTAC TACGGCGGCA GCGAGGGCGC CGGCCTCACC GCCATCGACA GCCATGAAGC GCTCGCGCGG CCAGGCTCGG TCGGCAAGGC GTTGCAGGGC GTGATCCACA TCTGCGCAGG GGACGGGCAG GGCCGGCCAT TGCCCGCCGG GCAGGACGGG CTGGTCTATT TCGAGCGCGA CGCGCAGCCC TTCCACTACC ACAAGGACCC CGAGAAGACG CGCGCCGCGC AGCACCCGTG CCACCCGTTG TGGTCGACCC TCGGCGACAT CGGCCATCTC GACGCGGACG GCTACCTGTA TCTGACCGAT CGCCAGTCCT TCATGATCAT TTCGGGCGGG GTCAACATCT ATCCGCAGGC CATCGAGAAC GCATTGGCGC TGCATCCGGG CGTAGCTGAC GTGGCCGTGA TCGGCGTGCC CGATCCGGAG ATGGGCGAAG CGGTCAAGGT CGTCATCGAG CCTGCCGCAG GCGTGCTGCC ATCGGCCGCG CTGGCGGAAG AACTGCTGGC TTTCGTGCGC GGCAAGGTCG CGCGATTCAT GGTGCCGCGC TCGCTCGACT TCATCGACCA GATGCCGCGC CTGCCCACCG GCAAGCTCTA CAAGCAGGTG CTGCGCGAAC GCTACGCGAA AGCGCCGGGG CAGCCGGATC ACCCCGATCA CCCCGCCTCG CACACCGCCC CCGCCGCCTA G
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Protein sequence | MAAPKYLGDF AVLTPDKPAV INGTTGASLS YRELEERSNR FAQYLYALGL RRGERIAMLL ENHLRCFEVA WAAFRSGLLL TAVNRYLTAD EAAYIITDSD ARVVVSSFAM RALAAQLSCA MPACERRLML DGTIPGWDSY EQAIAAASAA RLADEWLGAT MFYSSGTTGR PKGVVRAQRA CRIDEAPDLD TRMAMMRHYL FTAESIYLSP APLYHAAPLN YTTNVQFCGG TVVFMEKFEP MPALALIDRY RITHSQWVPT MFIRLLKLSP GQRAGFDLRS HRVAIHAAAP CPVEVKRQMI EWWGPIVHEY YGGSEGAGLT AIDSHEALAR PGSVGKALQG VIHICAGDGQ GRPLPAGQDG LVYFERDAQP FHYHKDPEKT RAAQHPCHPL WSTLGDIGHL DADGYLYLTD RQSFMIISGG VNIYPQAIEN ALALHPGVAD VAVIGVPDPE MGEAVKVVIE PAAGVLPSAA LAEELLAFVR GKVARFMVPR SLDFIDQMPR LPTGKLYKQV LRERYAKAPG QPDHPDHPAS HTAPAA
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