| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2830 |
|---|
| Symbol | |
|---|
| ID | 4693885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3180843 |
|---|
| End bp | 3182309 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639850592 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_997586 |
|---|
| Protein GI | 121609779 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.510786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.137623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAC GTTCGGCCTT GCATCCGCAG TGGGCACACA CTTCACCGCA AAAGTTGGCA
ATCAGATGGA TAAAAATGGA TAAAAACGGG CAGATCATCG AGCGGGAAAA GGGCTTGGCG
CGCAAGCTGT CGCAGCGGCA ACTGACCATG ATCGGCCTTG GCGGCGCGAT CGGTACGGGG
CTTTTCATGG GCAGCGGCAT CGCCATCGGC TACGCGGGCC CCGGCGTGCT GCTCAGCTAT
CTGATAGCGG CGACGATTGC GCTGATCATG ATGTACAGCC TGTCCGAGAT GGCGGTGGCC
CATCCGACGG CGGGCTCCTT TGGCACCTAT GCCGAGTTGT ACCTGAGCGA GTGGCTCGGC
TTCATCGTGC GCTACACCTA TTGGGCGGCC CAGTCGATTG CCATCGGCGG CGAGGCGGTG
GCGATTGGTG TCTATATGAC GTTCTGGTTT CCCGGCGTCC CGGTCTGGAT GTGGACGGCC
AGTTTCGGCG CCGCGATCAT CCATGCGAAT ACGCGCTCCG TGTCGAGCTT CGGCAGCCTG
GAATACTGGC TCTCGGCCAT CAAGGTCATG GCCATCTGCA TTTTCATCAC CGCCGGTCTG
GCGCTGATTT TCGGCATCGG CCACGCCGCC GTGGGTTTTG GCAATTACAC CGCCGATCGG
GGGTTTTTGC CCCATGGTTT TGCGGGCGTC TGGATGGGGG TGTTGATGGC CATTTTCTCG
TTTTATGGCA TCGAGATCAT TGCCGTGACT GCCGGCGAAA CGCAAGACCC GAAAATCGCC
GTACCGCGCG CGCTGCGCAC GATGATCGTG CGCCTGGTGC TGTTCTATGG GCTGTCGCTG
GCCATCATGT TGGCGATCGT GCCATGGGCC GAGGCGGGGG CCAAGGGCGT GACGCAAAGC
CCGTTCGTCA AGGTGTTCGC CTATTACGGC TTTCCCTATG CCGCCGCAGC GATGAATTTC
GTGCTGATCA CCGCCGCGCT GTCGAGCATG AACGCCAATT TGTACCTCTG CGCGCGCATG
TTGTTTTCAT TGGCCCGCGG GAATTTTGCC CCGGCGGCGT TCGGGCAACT GAACCGCCAG
GGGGCACCCG TGCGGGCCAC GCTGGTTTCC AGCGTCGGGG TATTGATCGC GGTTCTGACC
AGCATGTTCA GTTCCAGCGC CTACCACTAT ATGTTCGGCG TTGCGCTCGG CGGCGGCATT
CTGGTCTGGC TGATCATTTT GGCGAGCCAT CTTTCATTCA GAAGGCATTG GGCAAGGAAT
GATCTTGGCA CGTTATCGTT TCGTGCCCCA TGGCTTCCAT GGCCTCAGTA TCTTGGCATT
TTTCTGCTGA CGGCCATTTT GGTGACCATG GGGTTCGATC GCGAATTCTG GAATGTCGGC
ATCATTTCCG TCACGGTCTG GGTCATGGTG CTGGGCAGCG CCTATTGCCT GCGGAACGTC
TTGCGCAGCC TGCGTCCGAA ATCCTGA
|
|---|
| Protein sequence | MASRSALHPQ WAHTSPQKLA IRWIKMDKNG QIIEREKGLA RKLSQRQLTM IGLGGAIGTG
LFMGSGIAIG YAGPGVLLSY LIAATIALIM MYSLSEMAVA HPTAGSFGTY AELYLSEWLG
FIVRYTYWAA QSIAIGGEAV AIGVYMTFWF PGVPVWMWTA SFGAAIIHAN TRSVSSFGSL
EYWLSAIKVM AICIFITAGL ALIFGIGHAA VGFGNYTADR GFLPHGFAGV WMGVLMAIFS
FYGIEIIAVT AGETQDPKIA VPRALRTMIV RLVLFYGLSL AIMLAIVPWA EAGAKGVTQS
PFVKVFAYYG FPYAAAAMNF VLITAALSSM NANLYLCARM LFSLARGNFA PAAFGQLNRQ
GAPVRATLVS SVGVLIAVLT SMFSSSAYHY MFGVALGGGI LVWLIILASH LSFRRHWARN
DLGTLSFRAP WLPWPQYLGI FLLTAILVTM GFDREFWNVG IISVTVWVMV LGSAYCLRNV
LRSLRPKS
|
|---|
| |