Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2576 |
Symbol | |
ID | 4691950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 2910668 |
End bp | 2912920 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639850342 |
Product | type I secretion system ATPase |
Protein accession | YP_997339 |
Protein GI | 121609532 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00352017 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGCAG TACCCCGCGA CGACCGGCCC CGGCAAGAAC CGGCAACGCT CGCATCGAGC ACCGGACATG AGCCGCCAGC AGCAGCAGCA GCAACGACGA CACCAGCCCC GGCAGCGCCT TCGCCCGGTA TCGACACCGG ATTGGCCTGC GTCGGGTTGA TTGCGCGCTG GCACGGGATT GCAGCCGATG CCGATCAGTT GGCGCATGAA TTGGCCGTGG TTGGCCGTCC TTCAGAGACC AGCGACCTGC TGCTGGCCGC CAAGCGCCTG GGGTTGCAAG CCAAGGCCGT GAAGGTGGAT GCGGCCCGCC TGGCCACGAC GCCGCTGCCC GCCGTGGCCG TTGGACGGCG CGCTGGCGCA GCGCCGGATT TTTTCATTCT GGCGCGGCAC GATGCACGCG CCGAGGGCGC CCGGGTCCTG ATCCAATCGC CCAGCGTGGG CCACCCCGAG ACCCTGACGG TGGCGCAACT GCAAGCGCGC TGGAGCGGCG AGCTGATCTT GTTCACCACG CGCGCGTCGA TGGCCAATGA ACTGGCCCGG TTCGATTTCA CCTGGTTCAT TCCGGCCATC GTCAAGTACC GCAAGCTGCT GGCGGAGGTT TTTCTGGTCA GCCTGGTGTT GCAGTTTTTT GCGCTGATCA CGCCGCTGTT CTTCCAGGTG GTGATGGACA AGGTGTTGGT GCACCGGGGC TTTACCACGC TGGATGTGAT TGCCTTCGGC TTGACGGTGG TGGTGCTGTT CGAGGTCTTG CTCACCACCT TGCGCAGCTT TGTGTTCGCG CACACCACCA GCCGCATCGA TGTGGAGTTG GGCGCGCGGC TGTTTCGGCA CCTGCTGGCC CTGCCGCTGG CATATTTTCA GGCACGCAGA GTGGGCGACT CGGTGGCGCG GGTGCGCGAG TTGGAGAACA TCCGCGCCTT TGTCACCGGC AGCGCCATCA CCGTGGTGCT CGACTTGCTG TTCTCGGTGC TGTTCATCGC CGTGATGCTG CACTACAGCG GCTGGCTGAC CCTGATCGTC GTGCTCTCGC TGCCTTGCTA TGTGATCTTG TCGGCCTTGT TGACCCCGCT GCTGCGCGCG CGCCTGAACG AGCGCTTTCA CCGCAGCGCG GAGAACCAGT CCTTTTTGGT GGAAACCATC AGCGGCATCG ACACCGTCAA GGCCCTGGCG CTGGAGCCGC ATTGGACGCG CAAATGGGAT CAGCAACTGG CCGCCTACGT GTCCGCGAGT TTCAAGACCG TCACCGTCAG CAGCTTTGCC GGCAGTGGCG TGAGCCTGAT CTCCAAACTG GTGACGGTGG CCACCATGTA TGCCGGCGCC AGACTGGTCA TAGACAACCA ACTGACCGTC GGCCAGCTGA TCGCCTTCAA CATGCTGGCC GGCCAGGTGG CGCAGCCGGT GATACGTTTG GCGCAGCTGT GGACGGACTT CCAGCAGACA GGGATTGCGG TGCAGCGCCT GGGCGACATT TTGAACACGC GCACCGAGGC AGCGGGCCAC AAGAGCACCG TGCCGGCGCT GGCCGGGCGC ATCACGCTCG ATGCCGTGGT GTTTCGCTAC CGGCCGGACG GCCCCGAGGT GCTCAAGGAC ATATCGCTGG ACATCGGCGC CGGGGAGGTG ATCGGCATCG TCGGGCGCTC GGGCTCGGGC AAGAGCACGC TGACCAAACT GATACAGCGT CTTTACGTTC CCGAGCGCGG CCGGGTGCTG ATCGACGGCA TCGACCTGGC CCTGGCCGAT GCCAGCTCAT TGCGCCGCCA GATGGGGGTC GTGCTGCAAG AAAACACGCT GTTTGCCCGC AGCGTGCGCG AGAACATTGC GTTGGCCGAG CCTGGCGCGC CGCTGCAGGC GGTGATCGAA GCGGCGCGCC TGGCCGGGGC GCATGAGTTC ATCGTGGAAT TGCCCGAAGG CTACGACACC CTGGTGGGCG AGCATGGCTG CACCTTGTCG GGCGGGCAGC GCCAGCGCAT TGCGATTGCC CGCGCCCTGA TGAGCGACCC GCGCGTGCTG ATCTTCGACG AAGCCACCAG CGCGCTGGAC TACGAGAGCG AGCGCGTCAT ACAAGACAAC ATGAAGGCGA TCTGCGCCGG CCGCACGGTG GTCATCATCG CGCACCGGCT GTCGGCCGTG CGCGCGGCCC ATCGCATCAT CGTGATGGAG CGCGGACAAA TCGTGGAGAC CGGCACACAC ACCCAATTGC TGGGCTTTGA GGCCGGCCAC TATGCGCGGC TGCACCGGTT GCAGCAATGC TGA
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Protein sequence | MTAVPRDDRP RQEPATLASS TGHEPPAAAA ATTTPAPAAP SPGIDTGLAC VGLIARWHGI AADADQLAHE LAVVGRPSET SDLLLAAKRL GLQAKAVKVD AARLATTPLP AVAVGRRAGA APDFFILARH DARAEGARVL IQSPSVGHPE TLTVAQLQAR WSGELILFTT RASMANELAR FDFTWFIPAI VKYRKLLAEV FLVSLVLQFF ALITPLFFQV VMDKVLVHRG FTTLDVIAFG LTVVVLFEVL LTTLRSFVFA HTTSRIDVEL GARLFRHLLA LPLAYFQARR VGDSVARVRE LENIRAFVTG SAITVVLDLL FSVLFIAVML HYSGWLTLIV VLSLPCYVIL SALLTPLLRA RLNERFHRSA ENQSFLVETI SGIDTVKALA LEPHWTRKWD QQLAAYVSAS FKTVTVSSFA GSGVSLISKL VTVATMYAGA RLVIDNQLTV GQLIAFNMLA GQVAQPVIRL AQLWTDFQQT GIAVQRLGDI LNTRTEAAGH KSTVPALAGR ITLDAVVFRY RPDGPEVLKD ISLDIGAGEV IGIVGRSGSG KSTLTKLIQR LYVPERGRVL IDGIDLALAD ASSLRRQMGV VLQENTLFAR SVRENIALAE PGAPLQAVIE AARLAGAHEF IVELPEGYDT LVGEHGCTLS GGQRQRIAIA RALMSDPRVL IFDEATSALD YESERVIQDN MKAICAGRTV VIIAHRLSAV RAAHRIIVME RGQIVETGTH TQLLGFEAGH YARLHRLQQC
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