| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2360 |
|---|
| Symbol | |
|---|
| ID | 4694316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2664883 |
|---|
| End bp | 2666793 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639850126 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_997124 |
|---|
| Protein GI | 121609317 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0729] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.685865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTTT GCATACTGCG CTCCACAACC ATCATCCCGG CGCCAGCCCG ATGGGCGGCG
TTATTGCTGT TCAATGCGCT GAGCCTGCAA GCCTGCAGCC TGCTGCCGCG CGCGGACAAG
CCGGACCCGG CGCATGCCGA CCTTGCCGCA ACGGCCGCCC CCGCCTTTGC CGTGGAACTG
CGGGCGCCGG ACGATGTGCG CGAGGTGCTC GAGCGCCACC TGGAACTGCT GCGTTTTCGC
CATCTGAGCG ACCTGCAGCG CAACGAATTG CAGCGCCTGC TGGGGGCGGT CGACGCCAAC
GCCCGCGAGT TGCTGGGCAC CATGGGTTAC TTTGCCCCCG AGATCACGGT CGAATCGAGC
CAGACGCCGG ACAGCCAGGA AGCACCGCGC ACCGTGGTCA TCAGCGTGCA GACAGGCGCG
CAAACCCGCA TTGCCAGCGC AGACATCGCT TTTGCCCACG GCGCACGCGC TGTGGACGAC
GCCGAAAGCC GCGCCCAACA GCGGGTGCGG CGTAATTGGT CGCTGGCACC GGGCCAGCCC
TTTACCCAAT CGGCCTGGGA GGCGGCCAAG AACGACGGAC TGCGCCAGTT GCAGGCCCGG
CGCTACCCCA CGGCGCGCAT TGTCGACAGC CAGGCGGAGA TCGACGCCGA CCAGCACCAG
GCCCGGCTCA ACGTGACCTA CGACACCGGC CCGGCCTACC GCTTCGGGCC CTTGCGTCTG
GAAGGCAGCC AGCGCTACGC GCCCGACGGC GCGCGCCGCC TGGCGCGCCT GCCCACCGGC
GCCGACTATG ACGAGGCCCG GATGCTCGAC GCGCAGCAGC GCCTGGCCAG CAGCGGCTAT
TACGACTCCG TGTTCCTGAC CCTGGACACC GAAGGCAGCG ACCCGCAGGC CGCCCCCGTG
GTGGCGCAAC TGCGTGAAGC CCGGCTGCAA AAACTGGTCT TCGGCCCCGG CTTTTCCACC
GACGGCGGCG CGCGCCTGTC GCTGGAGCAC ATGCACAACC GGCTGCCCGG CCTGGGCTGG
CGCGCCGTGA GCAAACTCGC GCTCGAGCGC CAGGCGCAAA GCGCCGGCAC CGAATGGACC
GCCCTGCCCG AGGACGACGG CTGGCGCTGG TTTGCCGGCG CCCGGTTGCA GCGCGAAGTC
AACGGCGACT ACGACGTCGA CAGCGCGCGG CTGCGCACCG GCCGCAGCCA AAGCACGCAG
AACATAGACC GCAACTACTT CCTGCAATAC GACGCGGCGA ACAGCAAAAG CCACAACCGC
CAGGGGCTGG CCGCAATCCC GGACAGCACC GCAGTGAGCG CCAATTACGG CTGGACCGGC
CGCTACTTCA ACAACCCGAC GGCCCCCACG AGCGGCCATG GCGTGGCGCT GGAACTGGGC
CTGGGCAGCA CGCTGCGGCC CAAGCGCGAC CTGTTCCTGC GCACCCTGGC GCGCTGGCAA
TCCTTCATTC CGGCCGGACG GGTGCAGGAC GCGGCCGGCA AAGGCCGCAA TGCCCGCGTG
GCGCTGCGCG CCGAGGCCGG CGCCGTGCTG GCCCGCGCGG ACGCGCCAAT CCCCGAGACC
GAGCTTTTTC TGACCGGCGG CGACACCACC GTGCGCGGCT ATGGCTACCA CAGCATCGGC
GCCCGCACCG GGGATGGCCA ACTGCACGGC GGCCGTTATC TGGCCGCAGG CAGCCTCGAA
TGGCAGCGCC CCATCGTCTA TCGCGGCGCG CTCAGCGACT GGGAGAGCAC CCTGTTCATC
GACGCCGGCG CGGTGGCCGA CCGCTGGGGC CGGGGCGCAC TCAGGCCGCT GGTCGGACTC
GGCGCCGGCC TGCGCTGGCG CAGCCCCGTC GGCCCGCTGC AGACCGACCT GGCCTATGGC
CTGAGAGCCA GAAAACTGCG CCTGCACCTG CGCCTGGGGT TCAGTTTCTG A
|
|---|
| Protein sequence | MSFCILRSTT IIPAPARWAA LLLFNALSLQ ACSLLPRADK PDPAHADLAA TAAPAFAVEL
RAPDDVREVL ERHLELLRFR HLSDLQRNEL QRLLGAVDAN ARELLGTMGY FAPEITVESS
QTPDSQEAPR TVVISVQTGA QTRIASADIA FAHGARAVDD AESRAQQRVR RNWSLAPGQP
FTQSAWEAAK NDGLRQLQAR RYPTARIVDS QAEIDADQHQ ARLNVTYDTG PAYRFGPLRL
EGSQRYAPDG ARRLARLPTG ADYDEARMLD AQQRLASSGY YDSVFLTLDT EGSDPQAAPV
VAQLREARLQ KLVFGPGFST DGGARLSLEH MHNRLPGLGW RAVSKLALER QAQSAGTEWT
ALPEDDGWRW FAGARLQREV NGDYDVDSAR LRTGRSQSTQ NIDRNYFLQY DAANSKSHNR
QGLAAIPDST AVSANYGWTG RYFNNPTAPT SGHGVALELG LGSTLRPKRD LFLRTLARWQ
SFIPAGRVQD AAGKGRNARV ALRAEAGAVL ARADAPIPET ELFLTGGDTT VRGYGYHSIG
ARTGDGQLHG GRYLAAGSLE WQRPIVYRGA LSDWESTLFI DAGAVADRWG RGALRPLVGL
GAGLRWRSPV GPLQTDLAYG LRARKLRLHL RLGFSF
|
|---|
| |