| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1928 |
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| Symbol | |
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| ID | 4691344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 2162655 |
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| End bp | 2163452 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639849695 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_996699 |
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| Protein GI | 121608892 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.402085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC AAATGACAGC CCTCCTGGGC GCGTTGTTGG TACTGACCCT GGGTCTGGGC
GCCAGCGCAT CACACGCACA GCAGTCCATC CGGATTGGCG TGGAGGGTGA ATACGCACCT
TTCAACGAAG TCGACAAGGA TGGCAAGGTC AAAGGCTTTG ACGTAGATAT TGCAAACGCA
TTGTGCGATG AAATGAGGGT CAAATGCAGC TTCGTCATTC AGACATGGGA CGGCATCATT
CCGGCACTGA TATCCAGCAA GTACGACATG ATCGTCTCCA GCGTGTTGAT CACTGAAAAG
CGCAAGAAGG CAGTCGCATT CAGCAAACCC TACTATACAG ACCAGGCAGT GATCGTCGGC
CCCAAAGGCA AGGCCATGAC GATCCGTAGC GATGGATTCG AGGGCAAGAC CATCGGTGTT
CAAACAGCTT CCGTCTACGA AAAAATACTG AAAGAGAAAT TCCCGACGGC GACAGCCAAG
TCCTACGCCG CCGTGCCGGA CCACAATCTG GACCTGGGTA ATGGTCGTCT GGACGCCGTG
TTGGCCGCAC AGTTGCCCAT GCTGGAATGG CTCAAGACCA ACGAAGGCAA GAACTTCGAA
GTCAAAGGCC AGCCCTTCAT GGATGCCAAA TTCATGGGTG CAGGTGCCGG CGTCGCGTTG
CGCAAGGGCG ACACCGGGTT GCTGAATAAA GTCAATGCCG CGCTCGACAC CATCTTCAAA
AATGGCAAAT ACGACGCCAT CAACAAGAAG TATTTCCCCA TCAGCATTCG TCCGCAAGCC
AATGACATGC AACCATGA
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| Protein sequence | MKKQMTALLG ALLVLTLGLG ASASHAQQSI RIGVEGEYAP FNEVDKDGKV KGFDVDIANA
LCDEMRVKCS FVIQTWDGII PALISSKYDM IVSSVLITEK RKKAVAFSKP YYTDQAVIVG
PKGKAMTIRS DGFEGKTIGV QTASVYEKIL KEKFPTATAK SYAAVPDHNL DLGNGRLDAV
LAAQLPMLEW LKTNEGKNFE VKGQPFMDAK FMGAGAGVAL RKGDTGLLNK VNAALDTIFK
NGKYDAINKK YFPISIRPQA NDMQP
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