Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1698 |
Symbol | |
ID | 4693402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1892293 |
End bp | 1893414 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639849459 |
Product | extracellular solute-binding protein |
Protein accession | YP_996471 |
Protein GI | 121608664 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA GCTTTAAACA CTGGGGCGCC ACGCTGGCGC TGCTGACCAC TGCCCTGTGC ATTGCCGTGG GCGCGCATGC TGCAGAATCC AAGGTGCTCA ACATCTACAA CTGGTCGGAC TACATCGCCG ACGACACCAT CAAGAACTTC GAGAAAGAGT ACGGCATCAA GGTCCGCTAC GACAACTTCG ACAACAACGA AATCCTGCAC GCCAAACTGG TCGCCGGCAA GACCGGTTAT GACATCGTCG TGCCCGGCTC CCACTTTGCC AAGACCCAGA TCGAGGCCGG TCTGCTGCAA AAACTCGACA AGAGCAAGCT GAGCAACTGG GGCAATCTGG ACAAAGGGCT GCTGGAGCAG TTGAACAAGC TCGACCCCGG CAACGAATAC CTGGTGGACT GGCTGTGGGG CTATGTCACG GTGGGCATCA ACGTGAACAA AGTCAAGAAG GCGCTGGGCG ACATGCCGAT GCCGGACAAC GCCTGGGACC TGCTGTTTGA CGTGAAGTAC GTGAACAAGC TCAAGAGTTG CGGTGTCAGC GTGTTGGACT CGGCTTCCGA AGTGCTCCCG ATCGCCTTGC TGTACGCCGG CAAGCCCCCC TACAGCAAGG ACGCTGCCGA TTACGAGGCT GCCGGCAAAG TGCTCAAGGC CATCCGCCCC TACGTCACAC GCATCTCGTC GTCGGGCTAT ATCGAGGAAA TGGCCAGTGG CGCCATTTGT CTGGTGATGG GTTACTCGGG CGACATCAAC ATCGCCCGCA GCCGCGCGGC CGCTGCCAAG ACCAAAACGC CCGTCGTGAT CGAGGCACTG GTGCCCAAGT CCGGCGCCAC CCTGTTCTTT GACACCATGG CCATCCCCAA GGACGCCCAG AATGTGGAAA ACGCCCATTT GTTCATCAAC TACATCCTGC GTCCCGAAGT GCATGCGTCG CTGACCAACA AAGTGTTCTA CGCCAATCCC AACGCAGCCT CGCTGAAGTT CGTGACAAAG GACGTGGCCG AGAACAAGTC CATCTTCCTG GACAACGAAG CCATCAAGAC CATGGTGGCG CCTGATGCGC TGCCGCAAGC CATCCGCAAA GTCCAGACCA GCATATTCAC CAACTTCAAG GCAAGACGCT GA
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Protein sequence | MTKSFKHWGA TLALLTTALC IAVGAHAAES KVLNIYNWSD YIADDTIKNF EKEYGIKVRY DNFDNNEILH AKLVAGKTGY DIVVPGSHFA KTQIEAGLLQ KLDKSKLSNW GNLDKGLLEQ LNKLDPGNEY LVDWLWGYVT VGINVNKVKK ALGDMPMPDN AWDLLFDVKY VNKLKSCGVS VLDSASEVLP IALLYAGKPP YSKDAADYEA AGKVLKAIRP YVTRISSSGY IEEMASGAIC LVMGYSGDIN IARSRAAAAK TKTPVVIEAL VPKSGATLFF DTMAIPKDAQ NVENAHLFIN YILRPEVHAS LTNKVFYANP NAASLKFVTK DVAENKSIFL DNEAIKTMVA PDALPQAIRK VQTSIFTNFK ARR
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