Gene Veis_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1548 
Symbol 
ID4691793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1734737 
End bp1735654 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID639849312 
Productprotein of unknown function DUF306, Meta and HslJ 
Protein accessionYP_996325 
Protein GI121608518 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00510236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCGTC ACCGATCATC TGTCGGTCTG CGCTGGCCAT CGAAGCGCAT CGCGGCGTTG 
CATCGCTTGC CAATACGCTC GGTATGGGCC GCACGCTGCG CCTTGCGCTG CGCTCCGATG
GCTGCGCGCA GCCTGCGACA TCTGATCGGT GGCGCGGCAC TGGTCTGTGC TTTGCTGGCC
GGCTGCGCCA GCCGCCCGCC GGCGCCCGAC GCCGTGGTCT CCGGTGTGGC GCTGACGCGC
GAGCGGGTGC TGCTGCCCCC CGAGGCGGTT TTCGAAGCCA CGCTGCTCGA TGTCACCGAC
CCGGACCGGC CCCCGGTGGT GCTCGGCCGC CAGCGCCGCG CGCCTGCCGG GCCGGCGCCC
TATGCGATCT GGATTGCCTA CCCCTCGGCG CACTTTCTGC CCCAGGGCCG CTACGAGGTG
CGCGCCAGCG TCACGCTGCA AGGGCGTTTG CTGCTGGCCA GCAACCGGCG CCATCCGGTG
CCGCAGGCGC CGGCCTGGCG CCATGTGGAT GTGCTGCTGG AGCGCCTGCG GCCACAGCCG
GCCACGCAGC AGGCGGCAGT GCCGCTGACG CTGACGCATT GGCGGCTGGT GGCCATCGAC
GCCGAGACCC TGCCGCGCCC CGCCGAAGGC GAGGTGGCGC CGCACCTGGT GCTACAGGCC
GGTGAGGCCC GCGCCACGGG TTCGGGCGGG TGCAACCGGT TTCTCGCCGA CTATGCCTTG
CAGGACGCGC AACTGCGCTT TGGCCGCCTG GTCAGCAACA TCGCGCTGTG TCTGCGCAAC
GGCGCTTTGG AGCAGCGTTT CTTCGCCGCC CTGGGCGCGG TGCACAGCTT TGACCAGCAG
GGCCGGCAGT TGCTGCTGCG CGGCGCCCAG GGCCAGCCGC TGCTGCGCCT GGAGGCGGCC
GAGACGGCGC TGCGGTGA
 
Protein sequence
MSRHRSSVGL RWPSKRIAAL HRLPIRSVWA ARCALRCAPM AARSLRHLIG GAALVCALLA 
GCASRPPAPD AVVSGVALTR ERVLLPPEAV FEATLLDVTD PDRPPVVLGR QRRAPAGPAP
YAIWIAYPSA HFLPQGRYEV RASVTLQGRL LLASNRRHPV PQAPAWRHVD VLLERLRPQP
ATQQAAVPLT LTHWRLVAID AETLPRPAEG EVAPHLVLQA GEARATGSGG CNRFLADYAL
QDAQLRFGRL VSNIALCLRN GALEQRFFAA LGAVHSFDQQ GRQLLLRGAQ GQPLLRLEAA
ETALR