| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1364 |
|---|
| Symbol | |
|---|
| ID | 4690423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1525741 |
|---|
| End bp | 1526613 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639849133 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_996147 |
|---|
| Protein GI | 121608340 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.934292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG CCTTTGCCAC GTTGCTGTCG CTCGTAATCG ACGGCGTCGC CTACGGAATG
ATGTTGTTCC TCATCTCCGT TGGTCTGACG ATCACCTTGG GTGTAATGCG CGTCGTCAAC
CTTGCACATT CCGCATTCGC GATGATCGGC GGATATCTCG CCTTATGGAG CATGCAGCAT
GCAGGGCTCG GATTCTTCGT GGCGGTACCG ATCGCAGTCA TTGGCACGAT GCTGATCGGT
GCGTTGCTCG AGCGAACGCT TTATCGTTGG GTATACGCGA CGAGTGGCCT GGGACAGATG
CTCATGACGA TCGGCCTTGC CTTCGTCATC ACGGCCCTGT TCAAGAATCT CGGTGGAACC
CAGTTGCAGT CCGTGCCAAT ACCCCCCTCC CTTCAGGGCA ACTGGAACGT CGGCCCATTG
AGCCTGTCCG TGTACCGCGC CTTCCTCGTC GGGGCGAGTG CCGCAGTGGG ACTCAGCCTG
TGGCTCGGCC TGGAAAGAAC TTCGTTCGGG GCCAAGTTGA GGGCGTCTGT CGACAATCCA
CGGATAGCCC GATGTGTGGG CATCGATGTC CCTCTGGTCT TCTCGGTAAC GTTTGCCATC
GGATGCGGCC TCGCTGCATT GGGAGGTGCC CTCGGTAGCC AGTTCTTGCC GATCGAGCCG
TACTACGGAC TGAAGTATCT CGTGCATGTT CTCATCGTCG TTGCGGTCGG GGGCCTTGGA
AGCCTGCGCG GGTCGCTATA TGCGGGTCTG CTGCTGGGGG TGATCGATAC GCTCGGACGT
TACTACGTGC CAGCGTTGGG CGCCTTCGTT ATCTACCTCG CCGTCCTCGC CATCCTTCTG
ATTCGCCCCC ATGGCCTCGT GCCCAGAAGC TGA
|
|---|
| Protein sequence | MNTAFATLLS LVIDGVAYGM MLFLISVGLT ITLGVMRVVN LAHSAFAMIG GYLALWSMQH
AGLGFFVAVP IAVIGTMLIG ALLERTLYRW VYATSGLGQM LMTIGLAFVI TALFKNLGGT
QLQSVPIPPS LQGNWNVGPL SLSVYRAFLV GASAAVGLSL WLGLERTSFG AKLRASVDNP
RIARCVGIDV PLVFSVTFAI GCGLAALGGA LGSQFLPIEP YYGLKYLVHV LIVVAVGGLG
SLRGSLYAGL LLGVIDTLGR YYVPALGAFV IYLAVLAILL IRPHGLVPRS
|
|---|
| |