Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1279 |
Symbol | |
ID | 4695319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1414412 |
End bp | 1415893 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639849051 |
Product | major facilitator superfamily transporter |
Protein accession | YP_996065 |
Protein GI | 121608258 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CCCGGCCGCC CGAAGGCGCT CATACCGTAG CCGAAGGCGA AGGTACTCCA GTGAGCCAGT TGCTGCCGCG GCCGGTTGCC ATCACCGTCT TTTTGGCCCT GGCTTTCGCG TATTTCCTGT CGGCTTTGGT GCGGGCTGTC ACCGCCACGC TGGCGCCGAC ATTGGCGCCG GAGTTTGCGT TGCAGGCGCG CGATCTGGGT CTGCTGGCCG GGGGTTACTT TCTGGGCTTT GCCGCCATGC AGTTGCCATT GGGCCGCTGG CTGGACCGCC ATGGTCCGCG CAAGGTATTG CTGGGTTTTC TGGGCTTGGC CGTGCTGGGC TGCCTGGTGT TCGCGGCGGC CACCGGCTTT TCGGGTCTGC TGGCCGGGCG CGTGTTGTGT GGCGCAGGCG TCAGCGCCTG CCTGATGGCG CCGCTCACGG GCTATCGCCG CTGGTTCGCG CCCCAGGCGC AGATGAGTGC CAATTCCTGG ATGCTGATGA TGGGCTCGCT GGGCATGGTG GCCTCGACGC TGCCGGTGCA ATGGGCCTTG CCGCTGTGGG GCTGGCGGCC CTTGTTCTGG GCCTTGGCGG CCCTGATCGC GCTGGCCATG GTGGTGATTG CGCTGCGGGT GCCGGGCTGG GCCAGTGGCA CCGACGGCGC AGGTCGCGCA GGTGGCACCG ATGACACAGG CGGCGCTGCG GCCTCGGGTT ACGCCCTGGT GTGGCGCCAC CCGTACTTTC AGCGCCTGGC ACCGCTGGGC TTTTTCTGTT ACGGCGGCAT GATGGCCATG CAGACACTGT GGGCCGGGCC CTGGATGCAG CGCGTGGCGG GCTATACGCC GCTGGAGTCT GCGGCCGGCC TGTTCGGCAT CAATGTCGCC ATGCTCGGCG TGTTCTGGAC CTGGGGCATG GTCAACCCCT GGCTGCTGCG CAAGGGCTGG GGGGCCGATC GGCTGCTGGC CCTGGGGCTG CCGTTGAGCC TGGCAGTGCT GCTGGGCATC ATCATCGCCG GACCCCGGGC CGGGGGTGGC GCCTGGGCGC TGTATTGCGT GTCGTGCACC TGCGTGGCGC TATCGCAGCC GGCACTGGCG CTGGCGTTCC CGCAGGCGCT GGCCGGACGC GCGCTATCGG CCTTCAACCT GGTCATTTTT GCCGGCGTGT TCACGGTGCA ATGGGGCATC GGCCTGGCGG TGGATGCGTT TGTTGCCGTG GGGGCCACAG ATTTCGCCGC CGGGCCGCCC CAAGGCGAAA TGCGACCCCC TCGGGGGGCA GGGAGCGAAG CGACCGTGGG GGCCACAGGT TTCGCCGCCG GGCCGCCCCA AGGCGAAATA CGACCCCCTC GGGGGGCAGG GAGCGAAGCG ACCGTGGGGG CCAACACCAC GGCGGCTTTT CAGGCGGCGA TGGCACTGTA CTTGGCGTGC AACGCGGCGG CCTACGCCTG GTTTCTGTTT CGGGGCCAGC GCCATAATGC GCGGCAAACC CCCGTCCCAT GA
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Protein sequence | MSAARPPEGA HTVAEGEGTP VSQLLPRPVA ITVFLALAFA YFLSALVRAV TATLAPTLAP EFALQARDLG LLAGGYFLGF AAMQLPLGRW LDRHGPRKVL LGFLGLAVLG CLVFAAATGF SGLLAGRVLC GAGVSACLMA PLTGYRRWFA PQAQMSANSW MLMMGSLGMV ASTLPVQWAL PLWGWRPLFW ALAALIALAM VVIALRVPGW ASGTDGAGRA GGTDDTGGAA ASGYALVWRH PYFQRLAPLG FFCYGGMMAM QTLWAGPWMQ RVAGYTPLES AAGLFGINVA MLGVFWTWGM VNPWLLRKGW GADRLLALGL PLSLAVLLGI IIAGPRAGGG AWALYCVSCT CVALSQPALA LAFPQALAGR ALSAFNLVIF AGVFTVQWGI GLAVDAFVAV GATDFAAGPP QGEMRPPRGA GSEATVGATG FAAGPPQGEI RPPRGAGSEA TVGANTTAAF QAAMALYLAC NAAAYAWFLF RGQRHNARQT PVP
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