Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1033 |
Symbol | |
ID | 4690501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1145626 |
End bp | 1146867 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639848812 |
Product | major facilitator superfamily transporter |
Protein accession | YP_995827 |
Protein GI | 121608020 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.854206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCAA ATACCAATAG CCTCTTGCAA CCACCAGATC AGAAGATTCC ACGCGCTTCG ACGCATCTGT CCTCCTGGAT GACGGTTTTC CTCGCTGCAG CCTGCGGTCT GCTGGCGGCC AACATTTATT ACGCGCAACC ACTGGTCGGC TTGATTGGCG CGTCTTTGGG GTTGCCGCGC GCCGCCACGG GACTGATCGT GACGATGACC CAGATCGGCT ACGGTGCCGG TCTGTTGTTG ATCGTTCCGC TCGGGGACTT GTTCGAGAAC CGCCGCCTGA CCTTGGTCCT GGTCGTGCTC GCCGCAGTGG CTCTCTTGGC GGCAGGGGCT TCGACCCAAC CCGGGTTCTT TCTCGCCGCC TCCTTGTTCG TGGGACTGGG CACGGTGGCT GTGCAGGTGC TGGTTCCCTA CGCCGCCCAC ATGGCACCAG AGGCGGAGCG GGGCCGCGTG GTGGGCAACG TGATGAGCGG GCTCATGCTT GGCATCATGC TGGCAAGGCC TGTCGCGAGT TTCATCACCC AACTGTCGTC CTGGCATGTC GTGTTCATGC TGTCCGGCTC GGCCATGGCG GGACTTGCCC TGCTGCTCGG GTGGATGCTG CCGCGACGTG TTCCCACTTC CAGACTGCGC TACGCGGATC TTCTGGCATC GATGGGGCGG ATCGCAACGA CGATGCCAGT CCTTCGGCGC AGGGCGCTGT ACCACGCTTG CCTGTTCGGC GCCTTCAGCC TCTTTTGGAC GACGACGCCG CTGTTGCTCA CGGAGTCGTT CCATCTGTCT CAGGGCGAAA TTGCGCTCTT TGCGCTGGCC GGCGTGGCCG GTGCCATTGC GGCACCGATC GCGGGCCGGG TCGCGGACCG CGGCTGGACG CGCATCGCCA CGTGGGCGGC CATGCTGGCT GTCGCAGGGG CGTTTCTCAT GACCTCGATC GGAGAGCCCG GCTCGCATTG GAGGCTGGCA TTTCTGGTCG TTGCTGCCGT GGTTCTGGAC TTTGGGGTGT CGGCCCACAT GACGCTGGGA CAGCGCGCCA TCTTCGGGCT CGATCCCGCA CTTCGGGCGC GGCTGAACGG ACTCTACATG AGCACTTTCT TCATTGGCGG GGCACTTGGG TCGGGTCTGG GCGGGTGGGC CTATGCCGAG GCCGGGTGGT GGCTCACCTG CTGTATCGGT TTTGCCTTGC CCGTTCTTGC GTTGCTTTAC TTCGCAACGG AACCGGGAAC GCAAACGCAA ACGCAAACGT AG
|
Protein sequence | MKPNTNSLLQ PPDQKIPRAS THLSSWMTVF LAAACGLLAA NIYYAQPLVG LIGASLGLPR AATGLIVTMT QIGYGAGLLL IVPLGDLFEN RRLTLVLVVL AAVALLAAGA STQPGFFLAA SLFVGLGTVA VQVLVPYAAH MAPEAERGRV VGNVMSGLML GIMLARPVAS FITQLSSWHV VFMLSGSAMA GLALLLGWML PRRVPTSRLR YADLLASMGR IATTMPVLRR RALYHACLFG AFSLFWTTTP LLLTESFHLS QGEIALFALA GVAGAIAAPI AGRVADRGWT RIATWAAMLA VAGAFLMTSI GEPGSHWRLA FLVVAAVVLD FGVSAHMTLG QRAIFGLDPA LRARLNGLYM STFFIGGALG SGLGGWAYAE AGWWLTCCIG FALPVLALLY FATEPGTQTQ TQT
|
| |