| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0550 |
|---|
| Symbol | |
|---|
| ID | 4691602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 618389 |
|---|
| End bp | 619540 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639848328 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_995352 |
|---|
| Protein GI | 121607545 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0334765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCC GTCCGTTGGT CACCTTCGCG TTCAGTTCCG CCGCCTTGGC CGCCCCCGGG
CTGATGCGCA ATGCGTCGGC GCAGGAAAGC GGCGTGACCA GCAAGACGCT CGGCATTGGC
TGCTCCGCTC CCGTCAGCGG CCCCTTGGCG GGCCTTACCC ACGACTCCAG GCTGGGCATG
GAGGCGGCCG TGGCACATAT CAACCGGCGC GGCGGCATCT TTGGCCGAAT GCTGCAACTG
AACATCACGG ACGACGCTTA TGTGCCGCAG CGCACGGTCG ACAACGTCAA GCAGATGATC
GCCCAGGGCA ATGCCTTCGT GCTGCTCTCG TGCGCTGGCA CGCCGAACAA CCAGGCCCTC
TTGCCGCTGG TCGAAGAGGC CGGCATCCCT TATGTGGCGC CGCTCACCGG CGCCTCGTCG
CTGCGCAAAA GCTTGCGCAA CGTGTTCCAT GTGCGCGCCA GTTACACCGA CGAAATACGC
CGTCTGGTGC AGCGCCTGGC GGGCATGGGG CTGACCGGCG TGGGCGTGGT GTTTCTGGAC
AACGGCTTTG GCCGTGAATT GCTGGAAGAC GCCACGCATG CGATGGCCGA ACAACGCATC
AAGCCGCAGG TCCAGGCGGC GTTGACCGTC GACGGCAAGA ACCTCGGCGA AGTGCTGGAC
AAGGTGGCCC AAGCCCGTCC GGCAGCCGTG CTGCTGGCCA CCGTAGGCTC GGCATCGGTC
GCGTTGGTAC GCGGCCTGAA GAAAAACCAT CCGGGCCTGC TGATGGCGGG CACGAGCGTG
GCGCTCAGCG GCGACGAGAT CAAGCAGCTC GGCAAAGCCG GCAGCGGCAT TGCGGTGACC
ATGGTCGTGC CCGACGCGCA CCTGGCCAAA ATCCCGCTGG TGCGCGATTA CCAAAGCGCC
ATGCGCGCCA GCAACCACCG GGTGTTCACG CAGCGCAGCC TGGAGACCTA CATCAACCTG
CGCGTGCTGG CCGAGGGCCT GGAGCGCGCC GGTGCCGCAC TGACCCGCGC CAAGCTGCGC
GATGCGCTGG CCAGCATCCG CAACTGGGAC ATGGGCGGCT TCGTCATCGA CTACGCCAGC
CAGCCGCCCT ATGTCGGCTC GCGCTTCGTA GACCTGGGGG TGTTCAGCGG TACCGGGCGT
TTCCTGACTT GA
|
|---|
| Protein sequence | MQRRPLVTFA FSSAALAAPG LMRNASAQES GVTSKTLGIG CSAPVSGPLA GLTHDSRLGM
EAAVAHINRR GGIFGRMLQL NITDDAYVPQ RTVDNVKQMI AQGNAFVLLS CAGTPNNQAL
LPLVEEAGIP YVAPLTGASS LRKSLRNVFH VRASYTDEIR RLVQRLAGMG LTGVGVVFLD
NGFGRELLED ATHAMAEQRI KPQVQAALTV DGKNLGEVLD KVAQARPAAV LLATVGSASV
ALVRGLKKNH PGLLMAGTSV ALSGDEIKQL GKAGSGIAVT MVVPDAHLAK IPLVRDYQSA
MRASNHRVFT QRSLETYINL RVLAEGLERA GAALTRAKLR DALASIRNWD MGGFVIDYAS
QPPYVGSRFV DLGVFSGTGR FLT
|
|---|
| |