Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0304 |
Symbol | |
ID | 4694734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 343477 |
End bp | 349494 |
Gene Length | 6018 bp |
Protein Length | 2005 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639848088 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_995113 |
Protein GI | 121607306 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGG GACTGATCCG TATCCGCGGC GCACGCCAGC ACAACCTCAA GAATCTGGAT CTGGACATCC GCACCGGGGA ACTGACGGTG GTCACCGGCC CCAGCGGCTC GGGCAAGTCC AGCCTGGTGT TCGACACGCT GTACGCCGAG GGGCAGCGGC GCTATGTGGA GACCTTCAGC GCCTACGCGC GCCAGTTTCT CGAGCGCATG GACCGGCCCG CCGTGGACAA GGTAGAGGGC GTGCCCCCGG CGATTGCGAT CGACCAGACC AACCCGGTGC GATCGAGCCG CTCGACGGTG GGCACGATGA CCGAGTTGAA CGACCACCTG AAGCTGCTGT TCGCCCGCGC CGGCCAGTTG TTTGACCGGC AGACCGCGCA ATGGGTGCGC CACGATTCGC CCGAGACCAT TTATGCCGCG CTGCGCAGGC GCTGCGGCTT CGGCGCCGAA CCGGGCGAGC CGACCGAACC GGGCGTGCCG GACGAACGGC CCGGACAGCC CCCGGCCGAC CCGCGCATCG CGCTGACCTT TCCGGTGCAA CTGCCCGCCG ACACCTCGGC CGAGCAACTC GCGCAATGGC TGTCGGCCAG CGGCTTCACC CAGGTGCAGG CCGAGCGTGT GCTGGCGCCG CAGGCGGGTG CCGCGCCGGT CAAGGTGCTC GACGTGGTGG CCGACCGCTT GCGCTTGGGG CAGGCCGGCA AGGCGCGCGT GATCGAGGCC ATCGAGGTGG CTTTGAAGCG CGGCAATGGC CGGCTCGATG TCTACCGCCT GGACGACGAG GGCACTGGCA CTGGCACTGG CACTGGCACT GGCACTGGCA CTGGCACTGG CACTGGCGTT GGCGTTGGCA CTGGCGTTGG CGTTGGCACT GGCGCGCCCG AGCCATGGCG GTTTTCCGAC GGTCTGCACT GCCCCGACAG CGACCTGCGC TACCGCGACC CGATCGCGTC GATGTTCTCG TTCAACTCTG CCGTCGGCGC CTGCGACAGT TGCCGGGGTT TTGGCCGCGT GATCGGGGTC GATTACGCCT TGGTCATCCC GAACGACCGG CTGACGCTGC GCGCCGGCGC CATCAAGCCG TTGCAGACCC CGGCCTGGCA AGAGGCGCAG GACGACCTGA TGCGCCATGC CGAGACGGCA GGCATTCCGC GCGACACGCC CTGGTACCGG CTGACCGGGG AGCAGCAAAA ATGGGTCATC GGCGGCGCGC CCGGCTACAA GGCGGGGCAG TGGAGCACGC AGTGGTACGG CGTCGGGCGC TTTTTCGAGT ACCTGGAGAG CAAGGCGTAC AAGATGCATA TCCGCGTGCT CCTGTCCAAG TACCGCAGCT ACACGCCCTG CCCGGCCTGC GCCGGCGCGC GCCTGAAAAC CGAGAGCCTG CAATGGCGCA TCGGCAGCCG GCAGGACGCC GACGCCGTGA TCGAGCCAGC GCGCCGCTTC ATGCCCCAGG GCCTGTCATG GAGCCGCGCG CAGTTGGAAT CCCTGCCCGG CCTGTGCCTG CACGACCTGA TGCTGCTGCC GATCGACCGG CTGCGCCGGT TTTTTGCCGG CATGCAGTTG CCGCAAGGGG ACGCGGCCAA GGGCGGCGAC GCCCAGGCGC TGCGGCTGCT GCACCAGGAG ATCACGACGC GCCTGCAATA CCTGTGCGAT GTCGGCATCG GCTACCTCAC GCTGGATCGG CAAAGCCGCA CGCTGAGCGG CGGCGAGGTG CAGCGCATCA ACCTGACCAC GGCGCTGGGC ACCAGCCTGG TCAACACGCT GTTCGTGCTC GACGAGCCCA GCATCGGCCT GCACCCGCGC GACATGCACC GCATCACCGA GGCCATGCTG CGCCTGCGCG ACGCCGGCAA CACCCTGGTG GTGGTCGAGC ATGACCCGGC CGTGATGCTG GCGGCCGACC GCATCATCGA CATGGGCCCC GGCCCCGGCC GCCTGGGCGG GCAGATCGTG TTCGACGGCA GCACGGCCGA TTTGCGCACC GCCGACACCT TGACCGGCGC CTACCTGGGC GGGCACAAGC AGGTCGGCCT GCACTTCAAA CGCCTGGTGA CCGATGCCAC GCCGCGCCTC ATCCTGGAAG GCGCGCGCGC GCACAACCTG CACAACCTGT CGGTGGAGTT TCCGCTGCAA CGCCTGGTGA CCATCACCGG CGTCAGCGGC TCGGGCAAGT CCAGCCTGAT CCAGAACGTG CTGGCCCCGG CGCTGCTGCG CCACTTTGGC CGGGCCACCG ACAGCCCGAT GGCGCATACC CGCCTGCTGG GCGCCGAGCA ACTGGCGGAT GTGGTGTTCG TCGACCAGGC GCCGATCGGC AAGACCGCGC GCTCCAACCC CGTGAGCTAT GTCGGCGCCT GGGACAGCAT CCGCGCGCTG TATGCGCTGA CCCCGCTGGC CTGCCAGCGC AGCTACAGCG CCAGCAAATT CAGCTTCAAC CATGGCGACG GGCGCTGCCC GGCCTGCGGC GGCTCGGGCT TCGAGCATGT GGAGATGCAA TTTCTCAGCG ATGTCTACCT GCGCTGCCCG GACTGCGATG GCCAGCGCTA CCGGCCCGAG ATCCTGGAGA TACGCCTGGA ACGCGGCGGC CGGGCGCTGA GCGTGGCCGA TGTGCTGGCG CTGACGGTGG CCGAGGCCGC AGCGCTGTTT GCCACCGACC CCGGGGTGCT GCGCGCGCTG CAACCCCTGG TCGATGTGGG CCTGGCCTAC CTGGCCCTGG GCCAGCCCGT GCCCACGCTC TCGGGCGGCG AGGCGCAGCG CCTGAAACTG GCCGGTTACC TGGCCGAGGC CGCCCGCACG GGGGCCTCGT CGCGCCAGGC GCTGGCACGC AAAGGCAGCT TGTTCCTGTT CGACGAGCCT ACCACCGGAC TGCACTTCGA CGACATCGCC AAGCTCATGC GCGCGCTGCG CAAGCTCATC GATGCCGGGC ACTCGCTGAT CATCATCGAG CACAACCTGG ACGTGATCCG CGCCAGCGAC TGGCTCATAG ACCTGGGCCC CGAGGGCGGC GATGCCGGCG GCCTGATCGT CGCCGAAGGC CGGCCCGAAG ACCTGCGCCA GCACCCCCGC TCGCACACCG GCCAGGCACT GCGCGACTAC GAGCAGGCGC TGGGCGAAGG CGGCCACTCG GTGCACGAAA AAGCGGCAGC GCTACGAAAA ACAGAGCGCA CTGCGCGAGA AAAACACGCG CCAGCGGCGC AAAACGTCAT TCGAATCGTG AACGCCAAAG AGCACAACCT GAAGAACCTG AGCGTGGACA TCCCGCGCGG CAAGTTCAGC GTGGTCACCG GCGTCAGCGG CTCGGGCAAA TCGACGCTGG CCTTCGACAT CCTGTTCAAC GAAGGCCAGC GCCGCTACCT GGAAAGCCTG AACGCCTACG CGCGCAGCAT CGTGCAGCCG GCAGGGCGGC CCGAGGTCGA TGCCGTCTAC GGCATCCCGC CCACCGTGGC CATCGAGCAG CGCCTGTCGC GCGGCGGCCG CAAAAGCACG GTCGGCACGA CCACCGAGGT CTGGCATTTT CTGCGCCTGC TGTACGTCAA GCTCGGCACC CAGCACTGCG TGCACGACGG CGCCGCAGTG CAACCGCAAA CCCCCGAGAG CATCGCGGCC CAACTGCTGA CCCGGTTTCG CGGCCAGCAT ATCGGACTGC TCAGCCCGCT GGTGACGAAC CGCAAGGGCG TGTACACCGA GTTGGCCGAC TGGGCCCGCC CGCGCGGCTA CAGCCATTTG CGCGTCGATG GCCAATTCCT GCCCACCACG GGCTTTCCGC GCCTGGACCG CTTCAAGGAG CACAGCATCG AGCTGCCCGT GGCCAGCCTG GACATAGCGC CCGCCAACGA GGCCCTGCTG CGCCAGGCGC TGGCCGAAGC CCTCACGCAT GGCAAAGGCG TGGTGCATGT GCTCAGCCAC ATCGATGCCC TGCGCGCGGC GCTGACCGCA GGCAGCCCCA CGACCGGCAT AGGCCAGGTG CAGGTGTTTT CCACCCGGCG CGCCTGCCCG GTCTGCGCCC GTTCCTATGC CGAACTCGAC CCGCGCCTGT TCTCGTACAA CAGCAAGCAT GGCTGGTGCC CCGACTGCGT GGGCACGGGC CTGCGACTGA CCCAGGACCA GCGCCTGCGG CTCGACGGCT CGCTGGCGCA GGACAAGGAA AAAGGCCGCG AGCAGAGCTT TGCCGAACCC GAACTGGCAG ACCTGGCCGA CGGCGCCGGC AGCGCCTGCC CCTCCTGCCA GGGCACGCGC CTGAACCCCG GCGCCCGCGC GGTGAAATTC GCCGGCCTGG GCATCACCGA CATCGCCGCG CACACGGTGA CCGATCTGCG CCGCTGGATC GAGGCGCTGC GCACCGGGGG CGGCATGAGC CAGCGCGAGA CCGGCATCGC CCGCGACCTG TTGCCCGAAA TCGGCAGCCG CCTGGAATTC CTCGAAGAAG TGGGCCTGGG CTACCTCACA CTCGACCGGG CCGCGCCCAC GCTCAGCGGC GGCGAGGCGC AGCGCATCCG CCTGGCCGCG CAACTGGGCA GCAACCTGCA AGGCGTGTGC TATGTGCTCG ACGAGCCGAC CATCGGCCTG CATGCGCGCG ACAACCAGAT CCTGCTCGAC GCGCTGCACA AACTGGGCGA CAAGGGCAAC ACGCTGGTGG TGGTCGAGCA TGACGAAGGC ACCATCCGCC GCGCCGACCA CATCATCGAC ATCGGCCCGA GCGCCGGCAA ACGCGGCGGG CGGCTGGTGG CGCAAGGCAG CGTGGGCGAC ATCACCGCTG CGGCCGATTC GCAAACCGGC CGCTACCTGC TGCACGCGAT CACGCACCCG CTGCAAACGC GCCGCAGCGT GGCCCCCGAG GCGCCAGCCG AGACACAGGC CAACGCGCAG GCCGGGACAC AAACCAAGGC GCCAGCCGGG GCACAGGCCA AAGCGCAGGC CAACGCGCAA GCCGGGGCAC AGGCCAACGC ACAGGCCGGG AGCGCCGTGC GCTGGCTCAC GGTGCATGGC GCGCAACTGC ACAACCTGCA AAACCTCAGC GTCGCCGTGC CGCTGCGCCG CCTGGTGGCC GTGACGGGCG TGAGCGGCTC GGGCAAATCC ACGCTGGCGC GCGACGTGCT GCTGACCAAT GTGCAAGCCT GGGTGCAGCA ACGCGCCAGC CGGGCCGGGC GCGACGCGAT GGACGCGGGC AAAGCGCCGC CGCTGGTCGG CTGCACCGGG CTGTCGGGCT TCGAGAGCAT AGACCGCGTG CTGGAGGTGG ACCAGACACC GATCGGCAAA ACCCCGCGCT CCTGCCCTGC CACCTACATC GGCTTTTGGG ACAGCATCCG CAAGCTGTAC GCCCAAACGC TGGAGGCCAA GGCGCGCGGC TACGCGGCCG GGCGCTTCAG CTTCAACACC GGCGCAGGCC GCTGCCCCGG CTGCGAAGGC GCTGGCGTGC GCACCATAGA AATGAGCTTT CTGCCCGACG TCAAAGTGCG CTGCGAAACC TGCCATGGCG CGCGCTTCAA CCCCGAGACG CTGGCCGTCG GCTGGCGCGG CAAAAGCATT GGCGAGGTGC TGCAAATGGA AGTCGACGAG GCCGTGGACT TCTTTGCCAG CATGCCCGGC ATCGCCCACC CGCTGCAACT ATTGCAGGAC ATGGGCCTGG GTTATCTGAC GCTCGGCCAG CCCTCGCCCA CGCTCAGCGG GGGCGAGGCG CAGCGCATCA AACTGGTGAC CGAACTGAGC AAGGTGCGCG ACGACATCGC CCGCCGGGGG CAAAAAGCGC CGCACACCCT TTACGTGCTG GACGAACCCA CGGTGGGCCT GCACATGGCC GATGTCGACA AGCTGATCCG CGTGCTGCAC CGCCTGGTCG ATGCCGGCCA CAGCGTGGTG GTCATAGAGC ATGACCTGGA CATGATCGCC GAGGCCGACT GGATCATCGA CCTCGGCCCC GAGGGCGGCC AGCAAGGCGG GCGCATCGTC GCCGCCACGG TGCCGCAGGA ACTGGTGCGC CAGCGCAGCC ATACGGGCCG GGCGCTGGCG GCGGTGCTGG CCCGCTGA
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Protein sequence | MTQGLIRIRG ARQHNLKNLD LDIRTGELTV VTGPSGSGKS SLVFDTLYAE GQRRYVETFS AYARQFLERM DRPAVDKVEG VPPAIAIDQT NPVRSSRSTV GTMTELNDHL KLLFARAGQL FDRQTAQWVR HDSPETIYAA LRRRCGFGAE PGEPTEPGVP DERPGQPPAD PRIALTFPVQ LPADTSAEQL AQWLSASGFT QVQAERVLAP QAGAAPVKVL DVVADRLRLG QAGKARVIEA IEVALKRGNG RLDVYRLDDE GTGTGTGTGT GTGTGTGTGV GVGTGVGVGT GAPEPWRFSD GLHCPDSDLR YRDPIASMFS FNSAVGACDS CRGFGRVIGV DYALVIPNDR LTLRAGAIKP LQTPAWQEAQ DDLMRHAETA GIPRDTPWYR LTGEQQKWVI GGAPGYKAGQ WSTQWYGVGR FFEYLESKAY KMHIRVLLSK YRSYTPCPAC AGARLKTESL QWRIGSRQDA DAVIEPARRF MPQGLSWSRA QLESLPGLCL HDLMLLPIDR LRRFFAGMQL PQGDAAKGGD AQALRLLHQE ITTRLQYLCD VGIGYLTLDR QSRTLSGGEV QRINLTTALG TSLVNTLFVL DEPSIGLHPR DMHRITEAML RLRDAGNTLV VVEHDPAVML AADRIIDMGP GPGRLGGQIV FDGSTADLRT ADTLTGAYLG GHKQVGLHFK RLVTDATPRL ILEGARAHNL HNLSVEFPLQ RLVTITGVSG SGKSSLIQNV LAPALLRHFG RATDSPMAHT RLLGAEQLAD VVFVDQAPIG KTARSNPVSY VGAWDSIRAL YALTPLACQR SYSASKFSFN HGDGRCPACG GSGFEHVEMQ FLSDVYLRCP DCDGQRYRPE ILEIRLERGG RALSVADVLA LTVAEAAALF ATDPGVLRAL QPLVDVGLAY LALGQPVPTL SGGEAQRLKL AGYLAEAART GASSRQALAR KGSLFLFDEP TTGLHFDDIA KLMRALRKLI DAGHSLIIIE HNLDVIRASD WLIDLGPEGG DAGGLIVAEG RPEDLRQHPR SHTGQALRDY EQALGEGGHS VHEKAAALRK TERTAREKHA PAAQNVIRIV NAKEHNLKNL SVDIPRGKFS VVTGVSGSGK STLAFDILFN EGQRRYLESL NAYARSIVQP AGRPEVDAVY GIPPTVAIEQ RLSRGGRKST VGTTTEVWHF LRLLYVKLGT QHCVHDGAAV QPQTPESIAA QLLTRFRGQH IGLLSPLVTN RKGVYTELAD WARPRGYSHL RVDGQFLPTT GFPRLDRFKE HSIELPVASL DIAPANEALL RQALAEALTH GKGVVHVLSH IDALRAALTA GSPTTGIGQV QVFSTRRACP VCARSYAELD PRLFSYNSKH GWCPDCVGTG LRLTQDQRLR LDGSLAQDKE KGREQSFAEP ELADLADGAG SACPSCQGTR LNPGARAVKF AGLGITDIAA HTVTDLRRWI EALRTGGGMS QRETGIARDL LPEIGSRLEF LEEVGLGYLT LDRAAPTLSG GEAQRIRLAA QLGSNLQGVC YVLDEPTIGL HARDNQILLD ALHKLGDKGN TLVVVEHDEG TIRRADHIID IGPSAGKRGG RLVAQGSVGD ITAAADSQTG RYLLHAITHP LQTRRSVAPE APAETQANAQ AGTQTKAPAG AQAKAQANAQ AGAQANAQAG SAVRWLTVHG AQLHNLQNLS VAVPLRRLVA VTGVSGSGKS TLARDVLLTN VQAWVQQRAS RAGRDAMDAG KAPPLVGCTG LSGFESIDRV LEVDQTPIGK TPRSCPATYI GFWDSIRKLY AQTLEAKARG YAAGRFSFNT GAGRCPGCEG AGVRTIEMSF LPDVKVRCET CHGARFNPET LAVGWRGKSI GEVLQMEVDE AVDFFASMPG IAHPLQLLQD MGLGYLTLGQ PSPTLSGGEA QRIKLVTELS KVRDDIARRG QKAPHTLYVL DEPTVGLHMA DVDKLIRVLH RLVDAGHSVV VIEHDLDMIA EADWIIDLGP EGGQQGGRIV AATVPQELVR QRSHTGRALA AVLAR
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