| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0256 |
|---|
| Symbol | |
|---|
| ID | 4692204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 280268 |
|---|
| End bp | 282013 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639848040 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_995065 |
|---|
| Protein GI | 121607258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00336194 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.629082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTGA TGCATACGGC GCCGCGCAAC CTGCGCACCG CGTTGTGGCG GGTGCTGGTC
TTGGTGCTGG CCCTGGCGCA ACTGCACCCG GCACTGGCGC AGCTACCCAC GCGCACCCCG
CAGTCCACGG GCACCCCGCA GACCAGCACC CCGGCCGCCC CGCCGAGCAG CGCCATCACC
TGGAAAACCT GCAACCCCCC GCCCATGTGC TTTCGCAGCA AACAGGCGCG CCAGCAATGG
GCCAAGGACA ACCAATGCCA ATTCCTGGAG GATGTCTGCG AGGGCGCGCC CGCGAAGCCG
GACAACCAAG GCGCCAAGCA AGAAGACAAG GGCTTTTGGG GCGCGCTGTG GGACGACGTC
AAAGGCGCCC TGGTCTACGG CTACGAATTC GTCAAGGGCC TGATACACGG CCTCAAAGAC
CAGGTCACCG ACCTGTGGCA GATGCTCACC AATCCCGCCG AGGTGATCAG CGGCCTGGTC
GAACTGGGCA AAGCCTTCTT CAACGACCCC GATGGCACCC TGAAGATGCT CGCCGGACTG
CTCGGCCAGG AGGCGATAGA CACCATCAAG CGGGCCACCC AGTGCGGCGC CTACGACCTG
GGCAAGGTGA TTGGCAAAAA CGTCAATCCC GGCGCCATGT TCAAGTTGGC CGTCAATCTG
AGCAAATACG GCGGCAAACT GGCCGATGCG GTCAAGGGCA CCCGGCGCGA GTTCGGCTGC
GCCAGCTTTG CCGCCGACAC CTTGGTGCAC ACGCCCCGGG GCATGGTGCC GATCGAGCAG
ATCCGCGCCG GCCAGCAGGT GCAGTCGCGC CACGACCGCC TGTTTGGCGA CGCCCCGCAA
ACCGTCACCA AGACCTTTGC GCGCACGGCG CCCAGCTACC GGCGGCTGAG CACCGAGTTC
GATCAATTCA AACTCACCGA CGAGCACCCG CTGTGGGTGC AGGGCAAGGG CTGGACGCAG
GCCCGGCACA TCACCGACGA CGACGTGATC GCCGGCGCAC AGGGGGATGT GCGGGTGCTT
GGCAACGAGC CTGTGCAGCA ACCCCTGCCG GTATACAACT TCAGCGTCGC AAAAACCGCC
AATTACTTCG TCGGCACCGG TGCGATATGG GCGCACAACG CGAATTGCGA CGCAGCGGTT
CACATCAAGC CATGGAAAGA CTGCACGCCC CTGGAAAAGG GATTCAGGGG CGAGGTGATC
ACTTTCATGG ACATGATCAA GGCAGGCGCC GAACCTTTGG GCAGAACATT GGGCCTGAAT
CCAAAGGGTC GATCGCCGGT CCAGGCATTC AAGGCGTGGC ATGGACGGAC CGGAATCGAT
GGCATCTACA AAGTCAGAAG CAAAGTCAGG GATAAGCATG GGAATGTGGT CAAGGACAAG
GATGGCAAGG ACGTTGAAGA GGTCACCTAT GTCATCATCG AATCCAAGGC AACGGGCGGT
ATGAAAAATG GGGTACTGGA TGATATTGTC GCGAAATTGA CGAAGAACAA AAAAAACGAT
CGACAGATGA GCGAGGCATG GATCGAAAGA AATTTAAAAA ATATGGGATT GAGTGCCGCA
GATAAAAACG CCATCACTGC CGGTCTGAGA GACCCCAAGA AAGTAAAGAG AATATACGCT
CAGACCGATG CCGAAGGAAC AACATACCAC GAGATCAGAG GAATTGGCAA AGACGGCAAA
CCCAGTGTGA CCGAAGCACG GGTTAGCAAT GTAGTATTCG ATCCACAATC ACTGAAAGGA
ACATGA
|
|---|
| Protein sequence | MLLMHTAPRN LRTALWRVLV LVLALAQLHP ALAQLPTRTP QSTGTPQTST PAAPPSSAIT
WKTCNPPPMC FRSKQARQQW AKDNQCQFLE DVCEGAPAKP DNQGAKQEDK GFWGALWDDV
KGALVYGYEF VKGLIHGLKD QVTDLWQMLT NPAEVISGLV ELGKAFFNDP DGTLKMLAGL
LGQEAIDTIK RATQCGAYDL GKVIGKNVNP GAMFKLAVNL SKYGGKLADA VKGTRREFGC
ASFAADTLVH TPRGMVPIEQ IRAGQQVQSR HDRLFGDAPQ TVTKTFARTA PSYRRLSTEF
DQFKLTDEHP LWVQGKGWTQ ARHITDDDVI AGAQGDVRVL GNEPVQQPLP VYNFSVAKTA
NYFVGTGAIW AHNANCDAAV HIKPWKDCTP LEKGFRGEVI TFMDMIKAGA EPLGRTLGLN
PKGRSPVQAF KAWHGRTGID GIYKVRSKVR DKHGNVVKDK DGKDVEEVTY VIIESKATGG
MKNGVLDDIV AKLTKNKKND RQMSEAWIER NLKNMGLSAA DKNAITAGLR DPKKVKRIYA
QTDAEGTTYH EIRGIGKDGK PSVTEARVSN VVFDPQSLKG T
|
|---|
| |