| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0229 |
|---|
| Symbol | |
|---|
| ID | 4692346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 252093 |
|---|
| End bp | 252872 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639848013 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_995038 |
|---|
| Protein GI | 121607231 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.770951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCA ACGACACGCT CAAGGGCCGT ACCGCCTTGA TCACCGGCGG CGGTACCGGC
ATCGGCCTGG AGATCGCCAG CGCCTACGCC CGATTGGGTG CCTCCGTGAT GCTGGTCGGG
CGCAACCAGG AGCGCGCGCA GGAGGCCGCC GAGGGGCTGC GCCGCGCAGG CGGTCAGGCC
GCAGCCTGCC GATGCGATGT GCGCGACTAC GACCAGGTAA CGAACGCCGT TGCCGCCACG
CTCGCCCGCT TCGGTGCGCT CGACATCCTG GTGAACAACG CTGCCGGCAA CTTCGTCTGC
CCCAGCGCCG AGCTATCGCC CAATGGTTTC CGCACCGTGA TCGACATCGA CTTGAATGGC
ACCTTCCATG GCTGCCATGC GGCCCACCCG CACCTGAAAG CCTCGCGCCA TGGCGGCTCC
ATCATCAGCA TCATCACGAT GCGCGGCGTG ACCGGATGGC CGGGAGCCAT TCATGCCGCT
TGCGCCAAGG GCGGCATCTT GTCGCTGTCG CGCACCCTGG CGGTCGAATG GGGCGGCGAC
GGCATCCGGG TGAACACCAT CTCCCCCGGA CCGATAGCCG ACACCGAAGG CGTGCGCCGG
ATGTACATCG AGTCCGGCAA GGGGCCATCG GAGGTGGGCA AGACCGCCCT GGGCCGCTGG
GGCCGCAAGG CCGACGTTGC CAACGCCGCC GTCTTCCTGG CGTCGGATCT TGCCGATTAC
GTCACCGGCG CGAACCTGAT CGTCGACGGC GGCCGCTGGC TCAAGCAGGC GGCGGACTGA
|
|---|
| Protein sequence | MFTNDTLKGR TALITGGGTG IGLEIASAYA RLGASVMLVG RNQERAQEAA EGLRRAGGQA
AACRCDVRDY DQVTNAVAAT LARFGALDIL VNNAAGNFVC PSAELSPNGF RTVIDIDLNG
TFHGCHAAHP HLKASRHGGS IISIITMRGV TGWPGAIHAA CAKGGILSLS RTLAVEWGGD
GIRVNTISPG PIADTEGVRR MYIESGKGPS EVGKTALGRW GRKADVANAA VFLASDLADY
VTGANLIVDG GRWLKQAAD
|
|---|
| |