Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0178 |
Symbol | |
ID | 4691163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 197646 |
End bp | 198557 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639847963 |
Product | LysR family transcriptional regulator |
Protein accession | YP_994988 |
Protein GI | 121607181 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.758946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCC ATCTGCTGCA AGACACCACC CTGCGCTACT TTCTGGAAGT GGCCCACAGC GGCTCGCTGA CCGAGGCCTC GGCCCGCCTG CACGTGGCGG CCTCGGCGCT GAGCCGCCAG ATCGCGGGGC TGGAGGCGCA GTTGGGCACG CCGCTGTTCG AGCGGCACCC GCGCGGCATG GTGCTCACGG CGGCGGGCGA GATCCTCGCC ATCCACGCCC GGCGCACGGT GCTGGACGCC GAGCGCGCCC TGGGCGAGAT CGGCGCGCTG CAGGGCCTGC GCGCGGGCCA GGTGCGGCTG GCCACGTCGG ACGCCTTTGC CAACGAGCTG GTGCCGCGCC TGTGCGTGGA GTTCCAGCGC ACGCACACGG GCATCCAGTT CAGCGTGATC TCGCTGCCCA CGGCCCAGGT GCCCGGCGCG GTGCGCAGCG GCGCGGCCGA CATCGGCCTG TGCTTCAGCC GCGCGCCGCA CCAGGACATC GAGGTGGCCT ACCGCCAGAC CGCGCCCGTG CGGGCGCTGG TCCCGCCCGG CCACCCGCTG GCCCGGGCGC GCAGCGTGTC CCTGGCGCAG ATGGCCAGGC ACCCCCTGGC CCTGCCTCCG CCCGAGACGA CGGTGCGCCA GATGATCGAC ATCGTCTGCA GCCGCCAGGG TCTGCAGATG GCGCCGGTGC TCATCAGCAA CCATGCCAAG ACGGTGCTCA ACTTCGTGGC GCACGGGGGC GGCCTGTCGG TGGCCAGCGA GATCGCCGCG CGCCACCTGG TGGCGGCAGG CGCCATCGTG GCCCTGCCCA TCAGCGATCC GGGCATGGAC CTGCGCGACC TGGAAGTGCA GACCCTGGCG GGCCGCAGCC TGCCGGTGGC CGTGCAGGCG TTTCTCGATT TGCTCAAGGA GCGGCTGCCG GAGCGCTGGT AG
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Protein sequence | MRAHLLQDTT LRYFLEVAHS GSLTEASARL HVAASALSRQ IAGLEAQLGT PLFERHPRGM VLTAAGEILA IHARRTVLDA ERALGEIGAL QGLRAGQVRL ATSDAFANEL VPRLCVEFQR THTGIQFSVI SLPTAQVPGA VRSGAADIGL CFSRAPHQDI EVAYRQTAPV RALVPPGHPL ARARSVSLAQ MARHPLALPP PETTVRQMID IVCSRQGLQM APVLISNHAK TVLNFVAHGG GLSVASEIAA RHLVAAGAIV ALPISDPGMD LRDLEVQTLA GRSLPVAVQA FLDLLKERLP ERW
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