Gene Vapar_6332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6332 
Symbol 
ID7975654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp1068574 
End bp1069068 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID644796901 
Producthypothetical protein 
Protein accessionYP_002948160 
Protein GI239820975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.24237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATT TCGTTTCCTT CGCAGCCGGC GTGGCTGCAG GCACTGTGGC CATGTACTAC 
CTCGATCACC AGAGCGGCCG GCGGCGCCGG GCGCTCGCGC GCGACAAGGC CATTGCGGCC
GGGCATGAGG CCGCGGACAT GGCCGAATCC GCAGGCAAGA GAGCGGCGGA CCACCTGAAG
GGATACATGG CCACCGGCCG GTTCGATCGC ACCGGAGGCG GCGAACCCGA GACCGACTCC
CAACTGCACG AGCGCATCCG CGCACGGCTC GGACGGGTCG TGAGCCATCC GAGGTCGATC
GAGGTGGAAG TCGACCGGGG CAGCGTCCAC CTGCGGGGCC ACATCCTGAC CCGGGAGCTC
GACGACCTGC TCTACGAGCT GAAGCAGATG CGGGGCGTGC AGGCGGTGAC CAACGAACTC
AGCTGCCACG ACACGGCCGA GGGAATCTCC GAGCTGCAGG GCCGCACCGA GCCCGCCGGG
CGCCCGCTGC ATTGA
 
Protein sequence
MRDFVSFAAG VAAGTVAMYY LDHQSGRRRR ALARDKAIAA GHEAADMAES AGKRAADHLK 
GYMATGRFDR TGGGEPETDS QLHERIRARL GRVVSHPRSI EVEVDRGSVH LRGHILTREL
DDLLYELKQM RGVQAVTNEL SCHDTAEGIS ELQGRTEPAG RPLH