Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6332 |
Symbol | |
ID | 7975654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 1068574 |
End bp | 1069068 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796901 |
Product | hypothetical protein |
Protein accession | YP_002948160 |
Protein GI | 239820975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.24237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGATT TCGTTTCCTT CGCAGCCGGC GTGGCTGCAG GCACTGTGGC CATGTACTAC CTCGATCACC AGAGCGGCCG GCGGCGCCGG GCGCTCGCGC GCGACAAGGC CATTGCGGCC GGGCATGAGG CCGCGGACAT GGCCGAATCC GCAGGCAAGA GAGCGGCGGA CCACCTGAAG GGATACATGG CCACCGGCCG GTTCGATCGC ACCGGAGGCG GCGAACCCGA GACCGACTCC CAACTGCACG AGCGCATCCG CGCACGGCTC GGACGGGTCG TGAGCCATCC GAGGTCGATC GAGGTGGAAG TCGACCGGGG CAGCGTCCAC CTGCGGGGCC ACATCCTGAC CCGGGAGCTC GACGACCTGC TCTACGAGCT GAAGCAGATG CGGGGCGTGC AGGCGGTGAC CAACGAACTC AGCTGCCACG ACACGGCCGA GGGAATCTCC GAGCTGCAGG GCCGCACCGA GCCCGCCGGG CGCCCGCTGC ATTGA
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Protein sequence | MRDFVSFAAG VAAGTVAMYY LDHQSGRRRR ALARDKAIAA GHEAADMAES AGKRAADHLK GYMATGRFDR TGGGEPETDS QLHERIRARL GRVVSHPRSI EVEVDRGSVH LRGHILTREL DDLLYELKQM RGVQAVTNEL SCHDTAEGIS ELQGRTEPAG RPLH
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