| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6224 |
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| Symbol | |
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| ID | 7975440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 955352 |
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| End bp | 955876 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796794 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_002948053 |
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| Protein GI | 239820868 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCA TCGTGTCTGC TGACAGGCAC CGCGACGGTA TATCTGCCGT GGCGGCCCGG
CTGGCGCCCT ATCTGGGCAT TGCCTTCGCG GTTGTTCTGC TTGACCAAGT GTCGAAGTCG
CTCGCCACGC GATTCCTGCG CGGAGGCGAA ATCCTTCCCA TCACGCCCTT TGCCGATCTC
GTCTTGGCGC ACAACCGGGG CGTTGCCTTC TCCTTCTTGG CTGACGCCTC GGGCTGGCAG
CGATGGCTGT TTACGGCACT TGCCATCGCG GCGGCGGCGT TCATCTTCAA ACTGCTGGTG
CAGCCCGGCG GGACGCCGCT GTTCAGGGCG GCCTTGGCAC TTGTGCTCGG CGGCGCGCTG
GGAAATGCGA TTGACCGCTC GTGGCAGGGG CACGTGGTCG ACTTCATCCA TCTTCATTGG
CGCGAGGTCT ACGACTTCGC CATCTTCAAC GTGGCCGATT GCGCCATCAC TGCAGGCGCG
GCGCTTCTGG TCCTGGCTGA GATCAGGCGG TCGCGAGCCG CTTGA
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| Protein sequence | MTIIVSADRH RDGISAVAAR LAPYLGIAFA VVLLDQVSKS LATRFLRGGE ILPITPFADL
VLAHNRGVAF SFLADASGWQ RWLFTALAIA AAAFIFKLLV QPGGTPLFRA ALALVLGGAL
GNAIDRSWQG HVVDFIHLHW REVYDFAIFN VADCAITAGA ALLVLAEIRR SRAA
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