| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6143 |
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| Symbol | |
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| ID | 7975589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 864651 |
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| End bp | 866210 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796698 |
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| Product | gluconate kinase |
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| Protein accession | YP_002947972 |
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| Protein GI | 239820787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01314] gluconate kinase, FGGY type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.175001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGCA TCGTCATCGG GGTCGACATC GGAACCACCA GCACCAAGGC GGTGGCCTTC
ACGCCGGCCG GGCGCGTGCT GGCGCACGAC GCGGTCGAAT ACCCGCTGCT GCAGCCCGAG
GCCGCGGCCG CCGAGCAGGA CCCGGAGCAG ATCTTCCAGG CCGTGCTCGC GGCCATCGCC
GGCTGCGTGA AGCAGAGCAA GGCCGCGCCC GCCGACGTGC TCGCGGTGTC CTTCAGCGCG
GCGATGCACA GCCTGATCCT GGTCGATGCC GCGGGCGCGC CGCTCACGCG CAGCATCACC
TGGGCCGACC ACCGCGCCTC GGCCTGGGCC GTGCGTATCC GCGACGAATG GGACGGCCTG
GCAATCTACC GCCGCACCGG CACGCCGATC CATCCGATGT CGCCGCTGGC CAAGCTGGTG
TGGCTGCGCC ACGAGCGCGC CGAGCTCTTC GCACGGGCCG CGCGCTTCGT CGGCATCAAG
GAGTACGTGT TCTTCCGGCT CTTCGGCCAG TGGCAGGTCG ACCATTCGAT CGCCTCGGCC
ACGGGGCTGT TCGACATCGA GCGGCTCGAC TGGGACGCGG GCGCGCTCGC GCTGGCCGGC
GTGCGCGCCG AGCAGCTGCC GCGCCCGGTG CCGACCACCT GGCACATCGA GGGCCTGGCG
GCGGACACCG CGGCGCAGCT GGGCCTGGCG CGCGACACGC CGTTCGTGAT CGGCGCCAAC
GACGGCGTGC TCTCCAACCT TGGCGTGAAC GCGATGGCGC CCGGCGAAGT GGCCGTGACC
ATCGGCACCA GCGGCGCGAT GCGCACCGTG GTCGACCATC CGATGACCGA TCCCGAGGGC
CGCACCTTCT GCTACGCGCT GGCCGAGCGG CGCTGGGTGG TGGGCGGACC GGTGAACAAC
GGCGGCATCA TCCTGCGCTG GGTGCGCGAC GAGTTCGCCT CGGCCGAGGC CGAGACCGCC
AAGCGCCTGG GCATCGACAC CTACGAGGTG CTCACGCGCA TCGCCGAGCG CGTCTCCGCG
GGCTCCGAAG GGCTGGTGTT CCACCCCTTC CTCACCGGCG AACGCGCGCC CTACTGGAAC
GCCGACCTGC GCGGCTCCTT CTTCGGGCTG GGCATCCACC ACCGCAAGGA GCACATGATC
CGCGCGGTGC TCGAGGGCGT GATCTTCAAC CTGCACAGCA TCCTGCCGGC GGTCGAGTCG
ATCGCGGGCC CGAGCGCCCG CATCAAGGCC ACCGGCGGCT TCGCGCGCTC GGGCATGTGG
CGCCAGATGA TGGCCGACGT GTTCGACCGC GAAGTGGTGG TGCCCGAAAG CTTCGAGAGC
TCCTGCCTCG GCGCCGCGGT GCTCGGGCTC TATGCGCTGG GCCATGTCGA TTCGCTCGAC
GTGGTCGCGG GCATGGTGGG CGCGACCCAC CGCCACACGC CCAACGCCAA GAACGTTGCG
CTCTATCGGC AGCTGCTGCC GGTGTTCCTC TCGCTGCCGC ACAAGCTTGG CGAGGAATAC
CGGCTGCTTG CCGCGTTCCA GCAGCAGACG GCGGTGCCGC CGCCGGTGCG CAAAAGCTGA
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| Protein sequence | MGRIVIGVDI GTTSTKAVAF TPAGRVLAHD AVEYPLLQPE AAAAEQDPEQ IFQAVLAAIA
GCVKQSKAAP ADVLAVSFSA AMHSLILVDA AGAPLTRSIT WADHRASAWA VRIRDEWDGL
AIYRRTGTPI HPMSPLAKLV WLRHERAELF ARAARFVGIK EYVFFRLFGQ WQVDHSIASA
TGLFDIERLD WDAGALALAG VRAEQLPRPV PTTWHIEGLA ADTAAQLGLA RDTPFVIGAN
DGVLSNLGVN AMAPGEVAVT IGTSGAMRTV VDHPMTDPEG RTFCYALAER RWVVGGPVNN
GGIILRWVRD EFASAEAETA KRLGIDTYEV LTRIAERVSA GSEGLVFHPF LTGERAPYWN
ADLRGSFFGL GIHHRKEHMI RAVLEGVIFN LHSILPAVES IAGPSARIKA TGGFARSGMW
RQMMADVFDR EVVVPESFES SCLGAAVLGL YALGHVDSLD VVAGMVGATH RHTPNAKNVA
LYRQLLPVFL SLPHKLGEEY RLLAAFQQQT AVPPPVRKS
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