| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6135 |
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| Symbol | |
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| ID | 7975581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 856834 |
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| End bp | 857550 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796691 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947965 |
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| Protein GI | 239820780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.112796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCC TGCTCGAAAC CCACAGCCTC CAGGCCTTCT ACCGCGACGC CCAGGCTCTC
TTCGGCATCG ACTTCACGCT GGCCGCCGGC GAGCTCGTCG CCATCATCGG TGCCAACGGC
GCCGGCAAAT CCACCTTCCT CAAGAGCCTC GCCGGCCTCG TCCGCGTCCC GCGAGAAACC
ATCCGCTTCA AGGGCGAACC CATCGGCGGG CTTCCCCCCG GCGGGATCGT CCGGCGTGGC
CTCGCGATGG TCCCCGAAGG CCGGCGCCTC TTCCCGAGCC TGAGCGTCGA GGAGAACCTG
CGCATGGGCG CCACCGCGGC CCGCAAGGGT CCGTGGAACC TGCAGCGCCT GTACGCCCTG
TTCCCCGTCC TCGCCGAGAA GCGCCACGCG CCCGGCACCT CGCTGTCCGG CGGCCAGCAG
CAGATGGTCG CGCTCGGCCG CGCGCTCATG AGCAATCCCG AAGTGCTGCT GTGCGACGAG
CTCTCGCTCG GCCTCGCGCC CATCGTCATC CGCGAGATCT ATGCGGCCAT GCCCGCCATC
ACGGGCGAAG GCATGACCGT CGTCATCGTC GAGCAGGACG TGACGATGGC GCGGCAGGTC
TCGCAGCGCA TCTACTGCTT CCAGGAAGGC CGCGTGTCGC TCGAAGGAAA GTCGGGCGAA
CTCACGCGCG AGCAGATCTC GCAGGCCTAC TTCGGCATCG AGGCCGCCCA TGCTTGA
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| Protein sequence | MNALLETHSL QAFYRDAQAL FGIDFTLAAG ELVAIIGANG AGKSTFLKSL AGLVRVPRET
IRFKGEPIGG LPPGGIVRRG LAMVPEGRRL FPSLSVEENL RMGATAARKG PWNLQRLYAL
FPVLAEKRHA PGTSLSGGQQ QMVALGRALM SNPEVLLCDE LSLGLAPIVI REIYAAMPAI
TGEGMTVVIV EQDVTMARQV SQRIYCFQEG RVSLEGKSGE LTREQISQAY FGIEAAHA
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