| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6134 |
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| Symbol | |
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| ID | 7975580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 855987 |
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| End bp | 856706 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796690 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947964 |
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| Protein GI | 239820779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.204704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTGC TGGCATTGCA TGCGGTGAGC AAGTCGTACG GTGCGCTGCG GGTCACCGAC
GGCATCTCGC TCGAAGTGGC CGAGGGCGAG ACGCTCGGCA TCCTCGGGCC CAACGGGGCG
GGGAAGACCA CGCTGTTCAA CCTGATCTCG GGCGACGCGC GCGTCGATGC GGGGCGCGTG
GAATACGCGG GGCGCGACGT GACGCGGCTC AAGCCGCACC AGCGCTGCCA TGCGGGCATC
GGGCGCAGCT ACCAGGTGCC GCAGCCCTTC GGGAACATGA GCGTGTTCGA GAACCTGGTG
ACCGCGGCCT GCTTCGGCGG ACAGCAGACC GAGCGCGAGG CGTGGCGGAC GGCGCACGAG
GTGCTCGCGC AGACGGGGCT GATGCCGCAT GCGAACAAGC CGGCCGGCGG GCTCACGCTG
CTCGACCGCA AGCGGCTCGA ACTCGCGCGC GCGCTTGCGA CGAAGCCGCG CCTGCTGCTG
CTCGACGAGA TCGCGGGCGG CCTGACCGAG CCCGAGGCCG CGGTGCTGGT GGCGGAACTG
AGGCGCATCA AGGCGCGCGG CGTGACCATG ATCTGGATCG AGCATGTGGT GCATGCGCTG
CTGTCGCTCG CGGACCGGCT GTTCGTCATC AACTTCGGGC AGAAGCTGGC GGAGGGGGCG
CCGCTCGCGG TGATGAACGA TTCCGAGGTG CGTCGGGTTT ACATGGGGAT GGAAGCATGA
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| Protein sequence | MALLALHAVS KSYGALRVTD GISLEVAEGE TLGILGPNGA GKTTLFNLIS GDARVDAGRV
EYAGRDVTRL KPHQRCHAGI GRSYQVPQPF GNMSVFENLV TAACFGGQQT EREAWRTAHE
VLAQTGLMPH ANKPAGGLTL LDRKRLELAR ALATKPRLLL LDEIAGGLTE PEAAVLVAEL
RRIKARGVTM IWIEHVVHAL LSLADRLFVI NFGQKLAEGA PLAVMNDSEV RRVYMGMEA
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