| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6012 |
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| Symbol | |
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| ID | 7975297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 736115 |
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| End bp | 736981 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796573 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_002947847 |
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| Protein GI | 239820662 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCC CTCCTTCCCT TTTTGAACGC ATCGAAGCGG CGTCCTCCGA GATGACACGC
TCGGAGCGGC TCCTGGCCGC CTACCTGACC GCGAACGCGC GCGAGCTGAC CCTGGAGAAC
GCTGCATCGG TGGCGCGAAA ATCCGGCGTG AGCCCGATGA CCGTCGGGCG CTTTCTGCGC
ACGCTCGGCT ACGACAGCTT CGACGAGGTT CGTCGCGAAA CCAGTCGCCT GAGCGCACCT
GCGGAGCTTC GCATTGCCGG GCGCTTCGAG CAATTCAGCC GCAGCCAAGG TCCTGTGTCC
GACGCGCGCA GTGCGCAACT CACGCAGCAA ATCGACGCGC TGGTGGCCGC GCACGATCTG
GCGACCGGAG AGCACTGGAA CGCCATGGTG CGGCAGGTTG CGACATCCCA ACGTGTTTTT
GTCGCGGGCT ACCAAACCGT GCGCGGTGTT GCCTCCGACT TTGCAGCGCG CCTCGAGTAC
GTGCGCGAGG GCGTGAAGTT TCTCGACGGT GCGGACGGCA CCTACGCCGA ACTTCTAGGC
GCCCTGAAGA GCCAGACACG CTGTCTGGTT CTTGTCGACA TTCGTCGCTA TGCGAAGCAA
GCCGAAGCGC TGGCTTCGGC GGCCACGGAA GCCGGCATTC CGGTCTTTGT CATCACCGAT
GCCTACTGCC ACTGGGCTCG AACCTACACC CCCCATGTCT TTCATGTGCA GACGGATGTC
GGATTTTTCT GGGACTCCAC CGTTGCGATC GTGGGCTTCA TCAATCTCCT GATGAACGGC
GTGATCGAGC AACTCGGGAA GAAGGTGGGT GAACGTGTCA GCCGGCTCGA GAAGCTGCAG
GACCGATTTG GCGCGTTCCT CGATTGA
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| Protein sequence | MKSPPSLFER IEAASSEMTR SERLLAAYLT ANARELTLEN AASVARKSGV SPMTVGRFLR
TLGYDSFDEV RRETSRLSAP AELRIAGRFE QFSRSQGPVS DARSAQLTQQ IDALVAAHDL
ATGEHWNAMV RQVATSQRVF VAGYQTVRGV ASDFAARLEY VREGVKFLDG ADGTYAELLG
ALKSQTRCLV LVDIRRYAKQ AEALASAATE AGIPVFVITD AYCHWARTYT PHVFHVQTDV
GFFWDSTVAI VGFINLLMNG VIEQLGKKVG ERVSRLEKLQ DRFGAFLD
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