Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5920 |
Symbol | |
ID | 7974959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 624438 |
End bp | 625373 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644796487 |
Product | domain of unknown function DUF1738 |
Protein accession | YP_002947761 |
Protein GI | 239820576 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4227] Antirestriction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTGC GGCAGGTCGT GACGGACCGG ATCATCGCGA TGCTGGAGAA GGGCGGCAGC GTGTTCCGCG AACGCTGGAC GCGGGCGGCG GCGCGCGGGG TGCCTCGCAA CGGCAAGACC GGGGCGCCCT ACCGCGGCGC GAATGTGCTG CTGCTCTGGG AGGCGGCGAT CGAGGCGGGC TACGCGTCCA ACGTGTGGCT GACCTACCGG CAGGCGCAGA GCCTCGGCGC CCAGGTCCGC CGGGGCGAGC GCGGCGTGCT GTGCGCGCAC TTCGAGCGCA GGGCGCGGGA GCACCTTGAC GATGCCGACG ATGTCCTCTC GGATGGCGGC GTGGATGAGG AGCCCCTGAC GGCCCGTTCC GGTGTGCGCG CGGGCGTGCT GCTGTGCCGG CCGTTCTGGC TCTTCAACCT GGCGCAGATC GAGGGGTTGC CGCTGGAGGT CGTGGACCGG GGCATCGCCG CGCCGGCGGC TTCGCAGGGT CCCGTGGAGC GGGCGATGCG GCTGCTCGGG GGCTGCCATG CGACGATCCG GCACGGGTTT GACCGGGCGG CCTACCTGCC GGCGCTCGAC GAGATCCGTC TGCCGTGGCC GCGGCAGTTC ACGAGCGCCG AGGCGCTGTG CGCGACCGCG CTGCACGAGC TGGTGCACTG GACCGGCCAT CCCGAGCGGC TGAACCGCAG CTTCGGGCGG CGTTTCGGCG ATGCGGCCTA TGCGTTCGAG GAACTGGTGG CGGAGCTCGG CAGCGCGTTC CTCCTGGGGC AGTGCGGGCT GGTCGATGCC ACGGTCGAGG GGCATGCGGC CTACATCGAC GCCTGGCTGA AGGTGCTGCG GGCCGACCGC ACGGCGATTT TCACGGCAGC GCGCCTCGCG GAGGAGGCGT TCGCGTACAT CGTGGCGCGG GAGATGCCTG CCTTTGGGGA GGCCGCGATG GACTGA
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Protein sequence | MDVRQVVTDR IIAMLEKGGS VFRERWTRAA ARGVPRNGKT GAPYRGANVL LLWEAAIEAG YASNVWLTYR QAQSLGAQVR RGERGVLCAH FERRAREHLD DADDVLSDGG VDEEPLTARS GVRAGVLLCR PFWLFNLAQI EGLPLEVVDR GIAAPAASQG PVERAMRLLG GCHATIRHGF DRAAYLPALD EIRLPWPRQF TSAEALCATA LHELVHWTGH PERLNRSFGR RFGDAAYAFE ELVAELGSAF LLGQCGLVDA TVEGHAAYID AWLKVLRADR TAIFTAARLA EEAFAYIVAR EMPAFGEAAM D
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