| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5885 |
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| Symbol | |
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| ID | 7975936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 596137 |
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| End bp | 597486 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644796461 |
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| Product | amidohydrolase |
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| Protein accession | YP_002947735 |
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| Protein GI | 239820550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGAC CGATTCATCC GTTGCTCGCT TTGCTGACCA GCGCCGCGCT CAGCGTCGCA
AGCCTGGAAG CGAAGGCCTC GACGACATCG CCCGTGCCGC TCCATCTCAC AACTGTCGAG
CAGCGCAGCG CCGGCCTGCA GCCTCGGCTC GTCGAATGGC GTCGCGATTT TCATCGGCAC
CCCGAACTGT CGGGCCAGGA GGAAAGAACC GCACGGAAAG TCGCCGAGCA CCTGCGATCT
CTCGGACTGG AAGTGACCAC GGGCGTTGGC GGGCATGGCG TGGTCGGCCT TCTCAAGGGC
GCGTTGCCAG GAAAAGTCGT GGCACTGCGT GCCGACATGG ACGCGCTGCC AGTGGTCGAG
GAAACAGACT TGCCGTTCGC TTCCCGGGTG GTCGCCGACT ACATGGGCAA GCCGACGCCG
GTGATGCATG CATGCGGCCA CGACGGACAC ACTGCCATCT TGATGGGGGT GGCCGAATTG
CTGTCTCAGA TGAGGTCCCA ACTCAAGGGC ACCGTGAAGT TCATCTTCCA GCCGGCGGAG
GAAGGAATTC CTGACAGTAC CGGGGCTAGG GAAGGCGCGT CCTGGGGAGC GAAAGCCATG
ATCGAGCAGG GTGTCCTTCA GAATCCCCGC GTCGATGCGA TCTTCGGCCT GCACATCAAT
CCCGGTCTGC CGAGTGGAAG TATTGGGTAT CGAAGTGGAC CGCTCATGGC CGGCGCCGAC
GAAATCCACA TCCACGTCGA AGGAAAGCAG GCCCACGGCG CCTCACCATG GAATGGTGTG
GACCCGATCG TGGTGTCGTC CCAGATCATT CTGGGCCTCC AGACCATCGT CAGCAGGCAG
CTCAACATCA GCCAGGAGCC CGCGGTGATC AGCATCGGAG CCATTGCGGG TGGCAATCGG
TCGAATATCG TCCCGGAATC CGTCAAGCTG CTTGGAACCC TGCGAACGTT CGACGAGCCG
ATGAGGAACG ATGCCAAACA ACGCATAGCC CGAACCGCTA ACCTGATCGC TGAGTCTGCG
GGCGCCAGAG CCAAGGTCAA CTTCGGCCCC CTCAACTATT CGGTAACGAC CAACGATGCC
TCCTTGACCG AGGCGTCCCT GCCGGTTCTC AACCAAATGA CGGGCAACAG GGTGTCGGTG
ATTCCCAAGC GGAGCGCATC AGAGGATTTT TCCGAGTACC AGCGATTGGT ACCGGGAATG
TTCTTCCTTC TTGGCGCGAT GCCGGAAGGC AAGTCACTGG AGACGGTTGC ACCCAATCAT
TCACCGAAGT TCGATTTCAA CGAGGACGCG ATGGCGGTCG GAGTGCGGTC CTTGTCCGCG
TTGGCGATCG ACTATTTGAA CCGGCACTGA
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| Protein sequence | MTRPIHPLLA LLTSAALSVA SLEAKASTTS PVPLHLTTVE QRSAGLQPRL VEWRRDFHRH
PELSGQEERT ARKVAEHLRS LGLEVTTGVG GHGVVGLLKG ALPGKVVALR ADMDALPVVE
ETDLPFASRV VADYMGKPTP VMHACGHDGH TAILMGVAEL LSQMRSQLKG TVKFIFQPAE
EGIPDSTGAR EGASWGAKAM IEQGVLQNPR VDAIFGLHIN PGLPSGSIGY RSGPLMAGAD
EIHIHVEGKQ AHGASPWNGV DPIVVSSQII LGLQTIVSRQ LNISQEPAVI SIGAIAGGNR
SNIVPESVKL LGTLRTFDEP MRNDAKQRIA RTANLIAESA GARAKVNFGP LNYSVTTNDA
SLTEASLPVL NQMTGNRVSV IPKRSASEDF SEYQRLVPGM FFLLGAMPEG KSLETVAPNH
SPKFDFNEDA MAVGVRSLSA LAIDYLNRH
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