| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5854 |
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| Symbol | |
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| ID | 7975905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 566881 |
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| End bp | 569967 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644796432 |
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| Product | ABC transporter |
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| Protein accession | YP_002947706 |
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| Protein GI | 239820521 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAG AAAAATTTGA GCGAGGCTCC GAGTGGCGGC AGTGGGATCT GCATGTCCAT
ACGCCCGCCT CGTTTCATTG GCGAGGAAAG AGGTTCAATG CCGACCCCAA CTCGGATGAG
AACCGCTTGC TCATCGACGA AATGATCGCT GCGTTCAATG CCGCAGAACC AACGGTCTTC
GCGTTGATGG ATTACTGGAC CTTTGACGGC TGGTTTGCAC TGCGACGACG GCTCAAAGAA
CCAGGGGCTC CCAAACTCAC GAAGACCATC TTTCCGGGAA TCGAACTGCG GCTAGTAGCT
CCGATGCCGG GCCGCCTCAA TGCTCACGTT CTTTTCTCTG ATGCCGTTGC AGATCAGGTT
CTGCACGATT TCAAAGCGGC GCTGCTCGTC GAAGTCGTGG GTCGGCCGCT GTCGGATGCA
TCCCTTGTGC TGCTAGGGCG CGCCGCGTCG GACGACAAGC TGAAGATCCA TGGTTTCAAG
AAAGTTGAAG TCGATGCCGA CGATGAAAAG GCGCTCTTGG CCGGCTCCAA GATTGCGGAG
ATCAACTGTG ACAGCTACAA GAACGCAATC GAGAAGGTGC CACACGGGCA TGCGATCGGG
TTCATGCCAT GGGATACAAG TGACGGTCTC GCCGAGGTCA AATGGCATGA GCACTATGCG
TATTTCCTAG GCCTGTTCAA GACTTCGCCT ATCTTCGAGT CTCGGAACAT CGACCTCCGC
GGCGCTTTCG TCGGTGAGGT CACGCCCGGC AATTCGAAGT TCATCAAGAG CTTTCAGAAC
GCCCTATGCA ACGTTCCCAG GCTTGTCGTC TCTGGAAGTG ACGCCCACTG CTTCGTGGGC
GTGAAGGGGG ACAACGACAG ACGTGGCTAT GGGGATTACC CGTCCGGAAA GGCGACCTGG
ATCAAGGCTG ACCCTTCGTT TCATGGTCTT CTTCAGGCCA TCATGGAGCC GGCAAAACGT
TCCTACATCG GCGAGCGCCC GGAAAAGAAG ACCGAAATTT CCAAAAACAA GACGTTCTTC
ATCGACAGCG TCTCAATCAC TAAGATCCCG GGATCCACAA CAGGTGGAGC GTGGCTTGCT
GGCACCAATC TGCCGCTGAA CCCTGATCTG GTGGCGATCA TCGGAAACAA GGGCAGCGGG
AAAAGCGCGC TCGCTGACGT GATCGCGCTG CTTGGCAACT CGCGACAGAA AGCTCATTTC
TCCTTCTTGA AGAAGGAGAG ATTCAGGGGG AAGTCTGGGG ACCCTGCAAA GCACTTCACC
GCAACGCTGT CATGGCTCGA TGGCAGCACG GAGGATCGAA ACCTTAACGA CGATCCACCG
GAGGAAAAGG TGGAACTCGT CCGATACATT CCCCAAGGTC ATTTCGAAGA ATTGTGCAAC
GCGCATGTCA CTGGTCGTTC CAATGCCTTC GAAAACGAAC TGCGAGCAGT CATCTTCTCC
CACACAGATG CTTCAATCCG CCTTGGTGCA CTCGACTTTG ACCAGCTTAT CGAGGAGCAG
GAGAGCAGCT TTCGACATCA GCTCAACGAA TTCAGAAAAG ACCTGCGAAG AGTGAACCAG
GAAATTGCGG GCTACGAGAC GCAGCTTCAA CCTGAGGTTC GAAGTGCGAT CCAAGAGCAA
CTGGCCATCA AGAATCGCCA GATTGAGGAG CACATCAAGA TCAAGCCAGC GGTGATGGAA
AAACCTGCCG TCGAGTTGTC GCTCGAGCAG CAGCAAGCGG CGGCCTCGCT GGAGGCCATC
TCGAACCAGA TGCAAAACCT CGAGAAATCC GCGGCCTCGA ATGCCGCCAC CGCCCTGGCA
CTTGCCGGCA AGCTCAAGGC AATCCAGAAC GTGCGCGAGC GCTTGCGCCT ACTCGACCGC
TCTCGTACGC AATTTCTCGA AGACACGGCG ACGGATCTCA CCACTCTCGG TTTGCAGGCG
TCTGACCTCG TGACGATTGA ACTGAATCAC CAGCCACTCG ACAAGATTTC GGTTTCGATT
CCTGACGAGC AAGCAAAAAC TGTGGCGTCG GCTGGCGATG TCGTCACTCA GCGAGCCAAT
TTGCTTGCGG AGCAGACAGC GCTCAACGCA AAACTCAATG CGCCGCAGCT TCTGTACCAG
CAAAACCTGA AATCCTTGGT CGACTGGGAG GCCAAACTCG CAGAGCTGAC TGGTACACCT
GATGCGCCAG AGACATTGAA GGGGTTGCAA ACGCGTATCG CGCAGATTGA TAGCCTGCCC
GACCTTCTGC AAACGCACAG GGAACATCGC GCGACGTTGG CTGGAGAGAT TTTTGACATT
CTGGATGCTC AGCGGAAGGC GCGCGAGTCT CTCTTCAAAC CCGTTCAAGA CTTGATCCAT
AGCAACAGCC TGATCCGCGA CGAGTACAAG CTCCAGTTCC AAGCGACACT GGGTGGCTCA
GCAGACGGAG TTGCGACGTC TCTCTTCGAC CTAATTAAAC AGAACTCAAA GGAATTTCGG
GGCGAAGACG AGAGCTACGG CACCGTACGA AAACTGGCCG AAGAGTACGA CTTCAACACG
CGAGCAGACG TGCTCAGCTT CGTTGAAGCG CTGCACGGAA AGATTGTCGT GGCTGCGTCC
GGCGGTAACA AGGATACCGT CGGCATCGGC CCTGTGTTGA GAAAAGACAA GCTGGCAAGC
GATGTTTACG ATTTGCTCTT CGGGCTTTCA TTCCTTGAGC CGCGTTACTC GTTGCTTTTC
CAAGATGCAC AAATCGAGCA ACTGTCACCT GGTCAACGCG GCGCGCTACT TCTCATCTTC
TATTTGCTGG TCGATAAGGG GCGCAATCCG ATCATTCTGG ATCAGCCTGA GGAGAATCTA
GACAACGAGA CTGTGGTGAG CTTACTGGTC CCAGTCTTGA CCGAGGCTAA GAAACGTCGG
CAGATCATTA TGGTCACCCA CAATCCGAAT CTCGCGGTCG TCTGTGATGC GGAGCAGGTT
ATCTGGTCGG TATTCGATCG GAAGAATGCA TCGAAGATCT CCTATCTCGC CGGCTCCATC
GAGAACCCAG CCATCAACGG GCACGTCGTC AATGTTCTGG AAGGCACGAT GCCGGCGTTC
AACAATCGCC GCATCAAGTA CCACTGA
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| Protein sequence | MNQEKFERGS EWRQWDLHVH TPASFHWRGK RFNADPNSDE NRLLIDEMIA AFNAAEPTVF
ALMDYWTFDG WFALRRRLKE PGAPKLTKTI FPGIELRLVA PMPGRLNAHV LFSDAVADQV
LHDFKAALLV EVVGRPLSDA SLVLLGRAAS DDKLKIHGFK KVEVDADDEK ALLAGSKIAE
INCDSYKNAI EKVPHGHAIG FMPWDTSDGL AEVKWHEHYA YFLGLFKTSP IFESRNIDLR
GAFVGEVTPG NSKFIKSFQN ALCNVPRLVV SGSDAHCFVG VKGDNDRRGY GDYPSGKATW
IKADPSFHGL LQAIMEPAKR SYIGERPEKK TEISKNKTFF IDSVSITKIP GSTTGGAWLA
GTNLPLNPDL VAIIGNKGSG KSALADVIAL LGNSRQKAHF SFLKKERFRG KSGDPAKHFT
ATLSWLDGST EDRNLNDDPP EEKVELVRYI PQGHFEELCN AHVTGRSNAF ENELRAVIFS
HTDASIRLGA LDFDQLIEEQ ESSFRHQLNE FRKDLRRVNQ EIAGYETQLQ PEVRSAIQEQ
LAIKNRQIEE HIKIKPAVME KPAVELSLEQ QQAAASLEAI SNQMQNLEKS AASNAATALA
LAGKLKAIQN VRERLRLLDR SRTQFLEDTA TDLTTLGLQA SDLVTIELNH QPLDKISVSI
PDEQAKTVAS AGDVVTQRAN LLAEQTALNA KLNAPQLLYQ QNLKSLVDWE AKLAELTGTP
DAPETLKGLQ TRIAQIDSLP DLLQTHREHR ATLAGEIFDI LDAQRKARES LFKPVQDLIH
SNSLIRDEYK LQFQATLGGS ADGVATSLFD LIKQNSKEFR GEDESYGTVR KLAEEYDFNT
RADVLSFVEA LHGKIVVAAS GGNKDTVGIG PVLRKDKLAS DVYDLLFGLS FLEPRYSLLF
QDAQIEQLSP GQRGALLLIF YLLVDKGRNP IILDQPEENL DNETVVSLLV PVLTEAKKRR
QIIMVTHNPN LAVVCDAEQV IWSVFDRKNA SKISYLAGSI ENPAINGHVV NVLEGTMPAF
NNRRIKYH
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