| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5805 |
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| Symbol | |
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| ID | 7974926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 510042 |
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| End bp | 510560 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796386 |
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| Product | transcriptional regulator, AsnC family |
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| Protein accession | YP_002947660 |
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| Protein GI | 239820475 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0160115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTG ATCCTGTTTC TCTTGACGAG CATTGCCTCA AGATCCTTTC TGCGCTGCAG
CATGACGGGC GGCAAACCGT GCAGCAGATT TCCGAGGCCG TCGGGCTCTC GCCCACGCCC
TGCTGGAAGC GCATCAAGGA GATGGAGGCC GCCGGCGTGA TCCGCGGCTA CACCACGCGT
GTCGACCCCG AATTGGTGGG CCTGCACGTC TCGGCCGTGG CCGAGGTGAA CCTCGACCGC
CACAGCGAGG CGATGGTGCA GCGCTTCGAG GAGGTGGTGG CCGCGAGCCC GCAGATCATC
CGATGCGTGT CGGCCACCGG GCCCGCGGAC TACATCCTCC ACGTGACCGT GCCGGACATG
AAGCATTACG AGCGCTTTCT GCACGAGGTG CTCTTCAGCC TGCCGGGCGT GACGCACGTG
CGCTCGAGCA TCGTGCTGCG CGAGATCAAG TCGGAGGTAG CGCTGCCGCT GGGCCACCTG
CTCGGCGCGA AGGCGGGACC GGGGGCTTCG CGGCGCTAG
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| Protein sequence | MNVDPVSLDE HCLKILSALQ HDGRQTVQQI SEAVGLSPTP CWKRIKEMEA AGVIRGYTTR
VDPELVGLHV SAVAEVNLDR HSEAMVQRFE EVVAASPQII RCVSATGPAD YILHVTVPDM
KHYERFLHEV LFSLPGVTHV RSSIVLREIK SEVALPLGHL LGAKAGPGAS RR
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