Gene Vapar_5784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5784 
Symbol 
ID7974905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp487677 
End bp488204 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID644796365 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002947639 
Protein GI239820454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAA ACACTGAAAT GCAGGTAGTC AAAGCGACAG TGGGCTATGC GGCTGAAATC 
GTCTCCGTGT TGACGGACGC GACGAAATAC AAACTTCAGC GCGGCGATTT CGCCTGGGGC
AGCCGCGGTC CAAGCGAGCA AGAGGTGCTG GAGCAAATCA ACAGAGACGA AATGTACGTC
GTCCTGAGCG ACTGCGATGT CGTCGGCACC TTCCGCCTCC AGTGGGACGA TGAGCACTAT
TGGGGGAAGC AGCCGCCGGT GGCGGCCTAC ATGCACGGGC TCGCCGTCAA GGAAAGCGCT
CACGGCAAAG CTGTAGGCGC GAACGTTCTG ACTTGGACTG TTCAGGAGGC AGCCCGGCAG
GGCCGGCAGT ATCTTCGGCT GGACTGCGAT GAGAAGAACT TCGCCCTTTG CCGCTACTAC
GAGAGACGAG GATTCATTCA AGTCGGCGAA CGGGCTCTAC AAAGTGGCTA CGTAGCAGCG
CTTTACCAGT GCGAGACCGG CCTCAAAAAT GAAAGCGCAG CCGCATGA
 
Protein sequence
MQRNTEMQVV KATVGYAAEI VSVLTDATKY KLQRGDFAWG SRGPSEQEVL EQINRDEMYV 
VLSDCDVVGT FRLQWDDEHY WGKQPPVAAY MHGLAVKESA HGKAVGANVL TWTVQEAARQ
GRQYLRLDCD EKNFALCRYY ERRGFIQVGE RALQSGYVAA LYQCETGLKN ESAAA