Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5784 |
Symbol | |
ID | 7974905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 487677 |
End bp | 488204 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644796365 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_002947639 |
Protein GI | 239820454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGAA ACACTGAAAT GCAGGTAGTC AAAGCGACAG TGGGCTATGC GGCTGAAATC GTCTCCGTGT TGACGGACGC GACGAAATAC AAACTTCAGC GCGGCGATTT CGCCTGGGGC AGCCGCGGTC CAAGCGAGCA AGAGGTGCTG GAGCAAATCA ACAGAGACGA AATGTACGTC GTCCTGAGCG ACTGCGATGT CGTCGGCACC TTCCGCCTCC AGTGGGACGA TGAGCACTAT TGGGGGAAGC AGCCGCCGGT GGCGGCCTAC ATGCACGGGC TCGCCGTCAA GGAAAGCGCT CACGGCAAAG CTGTAGGCGC GAACGTTCTG ACTTGGACTG TTCAGGAGGC AGCCCGGCAG GGCCGGCAGT ATCTTCGGCT GGACTGCGAT GAGAAGAACT TCGCCCTTTG CCGCTACTAC GAGAGACGAG GATTCATTCA AGTCGGCGAA CGGGCTCTAC AAAGTGGCTA CGTAGCAGCG CTTTACCAGT GCGAGACCGG CCTCAAAAAT GAAAGCGCAG CCGCATGA
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Protein sequence | MQRNTEMQVV KATVGYAAEI VSVLTDATKY KLQRGDFAWG SRGPSEQEVL EQINRDEMYV VLSDCDVVGT FRLQWDDEHY WGKQPPVAAY MHGLAVKESA HGKAVGANVL TWTVQEAARQ GRQYLRLDCD EKNFALCRYY ERRGFIQVGE RALQSGYVAA LYQCETGLKN ESAAA
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