| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5741 |
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| Symbol | |
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| ID | 7974862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 447506 |
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| End bp | 448525 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644796322 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947596 |
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| Protein GI | 239820411 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.286317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCA TCATCGGCAC CGCGACCACC GGCATCACCC GCCGTCAGGC CTGCATCTTT
TCCGCAGGCG GCGCGTTCTG GCTCGCGAGC CGCGGCGCCG CGGCTGCCGA GGCCTATCCG
GACCATCCGC CGCACCTGGT CGTGCCGTTC ACGCCCGGCG GCTCCACCGA CGTGCTGGCG
CGCAGCATCG GGCAGGAGCT CGGCCGCGCG TGGAACCAGG CCGTGGTGAT CGACAACGTG
CCCGGCGCGG GCGGCTCCGT CGGCGCGGAG AAGGTCGCGA AGGCGCCCGC GGACGGCTAC
ACGCTGCTGA TGGGGCACAT CGGCACGCTG GCCATCAACC CGTCTCTCTA CCCCAAGCTC
GGCTACCACC CGCTGCGCAG CTTCGCGCCC GTGGCATGGG TCGCGCGCGT GCCGAACGTG
CTCGTGGTCC ATGCCTCGGT GCCGGCGCGC ACGCTGGCCG AACTGGTGGC GCTGGCCAAG
GCCAGGCCCG GCCAGCTGGC CTACGGCTCG GGCGGCAACG GCAGCGCGGC GCACATCGCG
ATGGAATACC TCAAGCTGCA GACGGGTGCT TCGCTGCTGC ATATTCCCTA CCGCGGCACC
GCGCCGGCCG TGAACGACCT GCTGGCGGGC CAGCTGCAGG CACTCTTCAC CGGCACGCCT
GCACTGCTGC CGCACATCAA GGCCGGCAAG CTGCGTGCGC TCGCGGTGTC GAGCCCGCGC
CGCATCGCGT CGCTGCCCGA GGTGCCCACG GTGGCCGAGA GCGGCGTGCC CGGCACCCAG
GATTTCGAGG CCGACCAGTG GTACGGCGTG GTCGCGCCGG CCGGCACGCC CGCGCCGATC
GTCGCGATGA TCAACCAGCA GATCAACCGC TCGCTCGCCT CGGCGGAGGT CAGGGCGCGA
CTCGCGGCCG AGGGCGCCGG GGCCACGCCC GCCACGCCGC AGGCCTTCGG CCAGCTGATC
GCGAGCGAGA TGGTGCGCTG GGAGCGCGTG ATCAAGGCGG TCCGCATCAC CGTCGATTGA
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| Protein sequence | MARIIGTATT GITRRQACIF SAGGAFWLAS RGAAAAEAYP DHPPHLVVPF TPGGSTDVLA
RSIGQELGRA WNQAVVIDNV PGAGGSVGAE KVAKAPADGY TLLMGHIGTL AINPSLYPKL
GYHPLRSFAP VAWVARVPNV LVVHASVPAR TLAELVALAK ARPGQLAYGS GGNGSAAHIA
MEYLKLQTGA SLLHIPYRGT APAVNDLLAG QLQALFTGTP ALLPHIKAGK LRALAVSSPR
RIASLPEVPT VAESGVPGTQ DFEADQWYGV VAPAGTPAPI VAMINQQINR SLASAEVRAR
LAAEGAGATP ATPQAFGQLI ASEMVRWERV IKAVRITVD
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