Gene Vapar_5715 details

Gene Information

• Locus tag: Vapar_5715
• ID: 7975768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: -
• Start bp: 429664
• End bp: 430242
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644796296
• Product: protein of unknown function DUF1185
• Protein accession: YP_002947570
• Protein GI: 239820385

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCTGA TCGACATCCG CAAGCGCAGT CTTTGCATCG AGACCATCTA CCACGAGGGC 
GGTCCGCCGG CCGCGACGCC GCTCAGGCTG GCGGCCGCCT GCGCGGTCAT CCACAACCCC 
TACGCAGGCC GCTACGAGCC GGACCTGCTG CCCTTCATGG CCGAGCTGCG CGCGCTCGGG 
ACGCTGCTGG CCACCGAACT GGTCGAGACG CTCGGGCGCG ACAAGGTCGA GGTCTACAGC 
AAGGCCGCGA TCGTTGGCGT GAACGGCGAG ATGGAGCACG GCGCCGTCTG GCACGAAGCC 
GGCGGCTGGG CCATGCGCGA GGTGCTCGGC GAGCCGAAGG CGATCGTGCC GTCGGCCAAG 
GCGGTGGCCG CCACCGGCTA CCGGCTGATG GTGCCGCTGC ACTACATCCA CGCCGCGTAC 
GTGCGCAGCC ACTACAACTC GATGGAGATC GGCATCCAGG ATGCGCCGCG GCCGAACGAG 
ATCCTGTTCG CGCTGGTGAT GGGCACCGGA GGCCGCGTGC ATGCGCGCCT GGGCGGGCTC 
ACCAAGGACA AGGTGTCCGT GCACGACGGG CAGCGTTGA 

 

Protein sequence

MSLIDIRKRS LCIETIYHEG GPPAATPLRL AAACAVIHNP YAGRYEPDLL PFMAELRALG 
TLLATELVET LGRDKVEVYS KAAIVGVNGE MEHGAVWHEA GGWAMREVLG EPKAIVPSAK 
AVAATGYRLM VPLHYIHAAY VRSHYNSMEI GIQDAPRPNE ILFALVMGTG GRVHARLGGL 
TKDKVSVHDG QR