| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5606 |
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| Symbol | |
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| ID | 7975218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 313407 |
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| End bp | 314675 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796190 |
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| Product | peptidase M20 |
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| Protein accession | YP_002947464 |
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| Protein GI | 239820279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.750571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACC ACTCCCAAGC CCCAGCGCGC GACGTGCTGC GCCAATTCAT CGACAGCCAC
TTCCAGGAAC AGGTCGAGAC CCTGGCGCAG CTGGTGCAAT GCCCGTCCGA CAACCCGCCC
GGTGATTGCG CGCCGCATGC CGAAGTGGCG GCCCGCCTGC TCGAGGGCAT GGACCTGGTG
GTCGAACGCC ATGCCGTGCC GCCTGCGTTC GCACAGCAGC ACGGCATGCG CAGCGTGACC
AACCTCATCG TGCGCGAGCG TTTCGGCGAG GGGCCGGTGA TTGCCCTGAA CGCGCACGGC
GACGTGGTGC CGCCGGGCTC GGGCTGGACC GGCTCGCCCT ACAGCGGCGA GGTGCGCGAC
GGATGGCTGT ACGGGCGCGG CGCGGCGGTT TCCAAGTCGG ACTTCACCAC CTACGCCTTC
GCGCTGCGTG CGCTGAAGCA GCTGCGCGCC AGCGGCACAC CGCTGGCCGG CACGGTCGAG
CTGCACCTGA CCTACGATGA AGAGACCGGC GGCATGACCG GACCCGGCTG GATTCTTTCG
CAAGGCCTGA GCCGCCCCGA CTACGTGATC TCCGCCGCTT TCTCGCACCA CGTTGTCGTG
GCGCACAACG GCTGCCTGCA CCTGGAAGTG ATCCTGCGCG GCAAGTCGGC GCATGCGGCG
CGGCCCGACA CGGGCGCCGA CGCCATCGAG GCTGCTGCGA CCTTGCTGCC CGCGCTGTAC
CACTACCGCG ACCAGTTGGC CGCACGGCCC TCGCAGACCC CCGGCATCAC GCATCCGACG
ATGGTGGTCG GGCTGATCCA GGGCGGCATC AACACCAACG TCGTGGCCGA CACGCTGAGC
TTGCGCATCG ACCGCCGCAT CGTGCCGGAA GAGACGCCCG AAGCGGTCGA GGCGGAACTG
CGGCAGGTCA TCGAAGACGC CTGCGCCACG CTGCCGGGCA TCGCCGTCGA GATCCGGCAG
ATCCTGCTGG CCCGCCCGTT CGCGCCCGCA CCCGGTGCGG CTGAGTTTGC CGCCTTGATG
TGCCGCGAGG CGAGCGCGGT CATGGGCAAG CCGGTGACAC CCATCGGCGT GCCGCTCTAC
ACCGACGCGC GCCTCTACAG CGAAGCCGGC ATCCCGACCG TGATGTACGG CGCCGGCCCC
GAGTCGCTGC TCGAAGCCAA CGGCCACCGC GCCGACGAAC GGGTTCCCCT CGACGAGCTG
CGCAAGGCGA CCCTCGTCGT TGCCCACACG CTGTTGCAGC TCATGGTCCT GCCAAAGGAA
ACCCGATGA
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| Protein sequence | MTDHSQAPAR DVLRQFIDSH FQEQVETLAQ LVQCPSDNPP GDCAPHAEVA ARLLEGMDLV
VERHAVPPAF AQQHGMRSVT NLIVRERFGE GPVIALNAHG DVVPPGSGWT GSPYSGEVRD
GWLYGRGAAV SKSDFTTYAF ALRALKQLRA SGTPLAGTVE LHLTYDEETG GMTGPGWILS
QGLSRPDYVI SAAFSHHVVV AHNGCLHLEV ILRGKSAHAA RPDTGADAIE AAATLLPALY
HYRDQLAARP SQTPGITHPT MVVGLIQGGI NTNVVADTLS LRIDRRIVPE ETPEAVEAEL
RQVIEDACAT LPGIAVEIRQ ILLARPFAPA PGAAEFAALM CREASAVMGK PVTPIGVPLY
TDARLYSEAG IPTVMYGAGP ESLLEANGHR ADERVPLDEL RKATLVVAHT LLQLMVLPKE
TR
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