| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5596 |
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| Symbol | |
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| ID | 7975208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 302551 |
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| End bp | 303477 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796180 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947454 |
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| Protein GI | 239820269 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGAT TCGATGCGTT GCAGGCCTTC GCCCGCGTGG TGGAGGCGGG CAGCTTCACC
AAGGCGGCGC AGACGCTCCA CATGAGCAAG ACCACCGTGA CGCAGCTGGT CCAGCAACTG
GAGGCGCGGC TGCGCGTGAG GCTCTTCAAC CGCACGACGC GCCAGGTCAG GGTCACGGCC
GAGGGCGCGG CCTACTACGA CCGCGTGGTG CGGCTGCTCG CCGACCTGGA GGACGCGGAC
GCCAGCCTGC TGGGCGCCTC GGCCTCGCCG AGGGGGCGCC TGCGCGTGGA CGTGCCCACC
CCGTTCGCCC GCATGATCCT GGTGCCTGCG CTGCCGGCGT TCCATGCGCG CCATCCCGAG
ATCCAGCTCG AACTCGGCGT GAGCGACCGC ATGGTCGACC TGATCGGCGA CAACGTCGAT
TGCGTGCTGC GCGGCGGCGA GCTCACCGAT TCATCGCTGA CGGCGCGCCG CGTGGGCGAG
CTGCGGCTCG GTGTCTTTGC GGCGCCGTGC TACCTGGAAC GTGCCGGCAC ACCCGCGCAC
CCGAACGAGC TCGAGGGCAC CCACCACCGC ATCGTGGGCT ACCTGAGCAC GCGCAGCGGC
AAGGTCGCGG CGCTGCGCAT GCAGCGTGGC GCCGAGCACA TCGAACTGCA GGGCCGCCAT
GTGGTCGCGG TCGACGACGG CAATGCCTAC CTCGCGGCCG GCGTGGCGGG CATGGGCGTT
CTCTGGCTGC CGCACTACAT GGCCGCGCCC CACGTGGCCC AGGGCGAGCT GGTGCCGCTG
TTCGAGGGCT GGCACTTCGG CGCGATGCCG ATGTACGTGA TGTTCCCGCC GAACCGGCAT
GCCAGCGCGA AGCTGCGCGT GTTCATCGAA TGGATCGACG AGCTGATGGC GCTGCATGCG
CCGATTGCTG CGCTTGGGGA TGCCTGA
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| Protein sequence | MDRFDALQAF ARVVEAGSFT KAAQTLHMSK TTVTQLVQQL EARLRVRLFN RTTRQVRVTA
EGAAYYDRVV RLLADLEDAD ASLLGASASP RGRLRVDVPT PFARMILVPA LPAFHARHPE
IQLELGVSDR MVDLIGDNVD CVLRGGELTD SSLTARRVGE LRLGVFAAPC YLERAGTPAH
PNELEGTHHR IVGYLSTRSG KVAALRMQRG AEHIELQGRH VVAVDDGNAY LAAGVAGMGV
LWLPHYMAAP HVAQGELVPL FEGWHFGAMP MYVMFPPNRH ASAKLRVFIE WIDELMALHA
PIAALGDA
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