Gene Vapar_5582 details

Gene Information

• Locus tag: Vapar_5582
• ID: 7975194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 289117
• End bp: 289764
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644796166
• Product: hypothetical protein
• Protein accession: YP_002947440
• Protein GI: 239820255
• COG category: [S] Function unknown
• COG ID: [COG4185] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0238097
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCGG CCGCCCGCCC CTTCATCCTG GTGCTGGCCG GTGTCAACGG CGCGGGCAAG 
AGCTCGGTCG GTGGTGCCCT GCTCGCCGAG CACGGCTTGA CCTGGTTCAA CCCCGACACC 
TGCGCGCGCG AGCTCATCGC GCAGCTCGGG ATCACGCCCG AAGAGGCGAA CGCCCGCGCA 
TGGAATCTGG GCCGCGAGCG GCTGGAAGCG GCCATCGCGC AGCGTTCCAA CTACGCCTTC 
GAGACCACGC TGGGCGCGAG CACCATTCCC GCGCTGCTCG CGCGCGCCGC GTCGAGCCAC 
GACGTGGTCA TGATCTTCTG CGGGCTGTCT TCGCCCGAGC AGCACATCGC CCGCGTGCGG 
GCGCGCGTGA CGCGCGGCGG CCACGACATT CCAGAGGCCA AGATCCGCGA GCGCTGGATC 
GCCTCGCGCG CCAACCTCAT CAAGCTGCTG CCCAAGCTCA CGCGGCTGCA GGTCTTCGAC 
AACAGCGCGG AGGCGCCGCC CGGCGGCGAC ATTGCGGACC CGGTGCTGGT GCTCGAACTG 
AGCGCGGGCG AACCCGTCTT TCCGCAGCCG GGCGACCTGG CCGCGCTCGC GGCCACGCCG 
GCCTGGGCGC GGCCGATCGT GCAGGCGGCG ATCGAGCTGC TGGGCTGA 

 

Protein sequence

MAAAARPFIL VLAGVNGAGK SSVGGALLAE HGLTWFNPDT CARELIAQLG ITPEEANARA 
WNLGRERLEA AIAQRSNYAF ETTLGASTIP ALLARAASSH DVVMIFCGLS SPEQHIARVR 
ARVTRGGHDI PEAKIRERWI ASRANLIKLL PKLTRLQVFD NSAEAPPGGD IADPVLVLEL 
SAGEPVFPQP GDLAALAATP AWARPIVQAA IELLG