| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5525 |
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| Symbol | |
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| ID | 7975382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 226303 |
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| End bp | 227694 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796111 |
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| Product | Glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_002947385 |
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| Protein GI | 239820200 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTCA GCGTGGCGAG CCCGCAAGAC CCGGCATTCG AGCCCTGGCT CGAAACACAG
CTGCGCCATT CGGCGGCGGC GATGCTGTCC AGCATTTCGC CGGTGTCGGT CGTCAAGCAC
CGGCCGGGCT TCGGCCAGAC CGTGCGGCCG ATCGCGGGCG CCATCGTCGC CTCGCCCGTG
CTTGCCGACT ACAACCCGGA CCCGGACTAC TTCTTTCATT GGTTCCGCGA TTCCGCCGTG
GTCATCGATG CATTGCGCCT GCTCCACCTT GAGGGGCGCA TCGGCGACGA AGCCCTGCAG
CACCTGCGCG ACTTCATCCG CTTCAGCCTG GACTTGAACC GCCTCGACGG CCGCGCGGCT
GCCGCGGTGG AGAACCGCAG CGCGTGCGTG GCCCCCGAGC TCCTGCAGTA CTGGCGCGAG
GACCATGACC TTGCCAAAGC CTTCGGCGAC CTGGTGGCCG CCGAGACGCG CGTGAACCCC
GACGGCACGC TCGACGTCTG CCGATGGAAT CGCCCCCAGC ACGACGGCGC GCCGCTGCGC
GCGCTGGCGC TGCTGCGCTG GGCGGCCGGC GGCCACCTCG ACGCGCCGCT GCTGGCGGAA
GCTGCCGAGC TGATCCGTTT CGATCTGGAC TTCACGCTGC GCCGCTGGCG CGAGCCGTCC
TACGACATCT GGGAAGAGGA GCTCGGCCAG CACTACTACA CGCTGCGTGT CGCAGGTGCG
GCGCTGGCCG AAGGCGCGGC GTGGCTGGAG GGCCTGGGCG ATGCGGCGCA GGCGCAGCGC
TGCCGGGAAG AGTCGCGCGC GGTGCTGCGC CTGCTCGACG GCTACTGGGT GGACGAACGC
GGCGAACGCG GCGCGGCGCC CGGCTACTAC CGCTCGCGCG CGCTGGAAGA CGGCCGGCCC
GGCCCGAAGG CGCTGGACAT CGCGGTGATC CTGTCGGCGA TCCACAGCCT CGGCACCGAG
GCCGCGCATG GACCGGCCGA TCCGCGCATG CAGGCCACGC TGGCGCGCCT GGACGCGCTG
TTCGATGCGG CCTATCCCAT CAACCATGGC CGTGCCGAGA GGCTTGGCGC GGCAATGGGC
CGGTATGGCG GCGATGTGTA CTACTCGGGC GGCGCGTACT ACTTCTCGAC GCTCGGCGCC
GCCGAGTTCT GCTTTCGTGC TGCCGCAGCG ATGGGCGGCG ATGCACGCCA TTGGCTCGAA
CGCGGCGACG CCTACCTCGC CACCGTGCGC GCGTACACGC CGGCCAGCGG CGACCTGTCG
GAACAGTTCG ACCAGCGCAG CGGCGCGCAG ACCTCGGCCA AGCAACTGGC CTGGAGCCAC
GCCGCGTTCA TTTCGTGTGT CTCGGCGCGC CGCAGCGCGG CCGCCGCCTG CGAGGCGTCG
CGGCAGCGAT GA
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| Protein sequence | MSFSVASPQD PAFEPWLETQ LRHSAAAMLS SISPVSVVKH RPGFGQTVRP IAGAIVASPV
LADYNPDPDY FFHWFRDSAV VIDALRLLHL EGRIGDEALQ HLRDFIRFSL DLNRLDGRAA
AAVENRSACV APELLQYWRE DHDLAKAFGD LVAAETRVNP DGTLDVCRWN RPQHDGAPLR
ALALLRWAAG GHLDAPLLAE AAELIRFDLD FTLRRWREPS YDIWEEELGQ HYYTLRVAGA
ALAEGAAWLE GLGDAAQAQR CREESRAVLR LLDGYWVDER GERGAAPGYY RSRALEDGRP
GPKALDIAVI LSAIHSLGTE AAHGPADPRM QATLARLDAL FDAAYPINHG RAERLGAAMG
RYGGDVYYSG GAYYFSTLGA AEFCFRAAAA MGGDARHWLE RGDAYLATVR AYTPASGDLS
EQFDQRSGAQ TSAKQLAWSH AAFISCVSAR RSAAAACEAS RQR
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