| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5492 |
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| Symbol | |
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| ID | 7975349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 195000 |
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| End bp | 195989 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796079 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947353 |
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| Protein GI | 239820168 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA CCCTCGTTTC CCGCCGCCGC CTGCTCGCCG GCGCGGGGCT GCTCGCGCTG
CAAGCGCGGC TGCACGCCAG CGAAGCCGGC GGCTGGCCGG CACGCCCCAT CCGCATGGTC
GTGTCCGGCC CCGCGGGCGC GGGCTCGGAC ATCTTCGCGC GCCTTCTGGC CGGGCCGCTG
CAGCAGGCGC TCGGGCAGCC CGTGGTGGTG GACAACAAGC CCGGCGCCAA CGGCCTGATC
GGCAACGATG CGGTCGCCAA GGCACCGCAC GACGGCTACA CGATCCTGCT GTCGCCGTCC
TCGGCCATCG CGATCAACCC GGTCATCCAG CCGAAGATGC CCTATGACGC GCAGAAGGAC
CTGCTGCCCG TCGCCCAGGT CGGCGCCGCG GGCATCCTGC TGGTGGCGAA CCCGGCCACG
GGCCTCGCGT CGCTGGCGGA CCTGGTGCGC CATGCCAGGG CCAACCCCGG CAAGCTGGCC
TATGGCTCCT GGGGCAGCGG ATCGACCGGC CACCTGGTGA TGGAGGGTCT CAAGGCGCAG
TACGGCATGG ACCTGGTGCA CGTGCCCTAC AAGGGCGTCT CGCCGCTGCT GAGCGACCTG
CTGGGCAACA GCATCGGCGT GGGCTTTGTC GACATCGCGT CGCCGGTGCC CCACATCCGC
AGCGGCAAGC TGCGGGCACT GGGCTGCACC GGCTCCGCGC GCGGGCCGGC ACTGCCCGAC
GTGCCCACGC TGACCGAGCA GGGCTACCGC TTCGATGCGG ACGGCTGGTA CGGCGTCTTC
GCGCCGGCCG GCACGCCGCG CGAGGTGGTG CTGCGCCTGA ACCAGGAGAT CAACCGCATT
CTCTCGGCCG ACGAGATCGT CCAGAAGTTC GCCGCGCAGA ACATGCCGCG CCCGCCGGTC
AAGGATGCCG ACCAGTTCGC GGCCACCGTG CGGCGCGACC TCGCGGCCTG GCAGTCGCTG
GCCAAGGTCG CCAGGCTGCG GCTCGACTGA
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| Protein sequence | MTDTLVSRRR LLAGAGLLAL QARLHASEAG GWPARPIRMV VSGPAGAGSD IFARLLAGPL
QQALGQPVVV DNKPGANGLI GNDAVAKAPH DGYTILLSPS SAIAINPVIQ PKMPYDAQKD
LLPVAQVGAA GILLVANPAT GLASLADLVR HARANPGKLA YGSWGSGSTG HLVMEGLKAQ
YGMDLVHVPY KGVSPLLSDL LGNSIGVGFV DIASPVPHIR SGKLRALGCT GSARGPALPD
VPTLTEQGYR FDADGWYGVF APAGTPREVV LRLNQEINRI LSADEIVQKF AAQNMPRPPV
KDADQFAATV RRDLAAWQSL AKVARLRLD
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