| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5445 |
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| Symbol | |
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| ID | 7975139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 148875 |
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| End bp | 149900 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796033 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947307 |
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| Protein GI | 239820122 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.237342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC CAAACAAATT GCCCCGCCGC TCATTCCTGG AGAAAGCGGC CATCGGTGTC
GTTACCTCCC AGTTCGCGGC AGGCGTTCCA GCTTTCGCAC AGACGCGCGC CGCGTCGAGG
CCGCTCAAGC GCCTCGAGCC ACTCAAGAGC ATCGAGGCCG GCGTGCTGAA CATCGGCTAT
GCGGAACTGG GGCCTGCGAA CGGCGCACCG ATCCTGCTTT TGCATGGCTG GCCCTACGAC
ATCCATACCT ATGCCGAGGT TGCGCCGATC CTGGCCTCGC AGGGGTACAG AGTCATCGTC
CCGTATGTGC GCGGCTATGG CACGACGCAA TTCATTTCCA GCGAGACGCC TCGCAACGGT
CAACAGGCGG TGCTGGCCGT TGACATCATT GCGTTGATGG ATGCGCTGAA GATCCAGCAG
GCCACTATCG GCGGCTGCGA TTGGGGCGCT CGGACGGCCT GCATCCTCGC AGCCTTGTGG
CCGGAGCGCG TCAAGGCCCT TGTCTCCGTC AGCGGTTATC TGATCGGTAA CAGGGAGTCG
GGCAAGGCTC CTTTGCCACC GAAAGCCGAA CTGCAGTGGT GGTACCAGTA CTACTTCGCC
ACCGAGCGCG GCCGTGCCGG CTACGAGAAG AACCGGCACG ACTTCTCGAA ACTGATCTGG
CAGATCGCTT CTCCCAAATG GGCCTTCGAC GATGCCACCT TCGACCGCAG CGCTGCCGCC
CTGGAGAACC CGGACCATGT CGCCGTCGTG ATCCACAACT ACCGCTGGCG GCTCGGCCTG
GCCGAAGGCG AATCGAAGTA CGACGACCTG GAGAACCGGC TCGCCAAGGC TCCGGTCATC
ACCGTCCCCA CGATCACTTT CGAAGGCGAT GCCAACGGTG CACCGCATCC TGAGGCGAGC
GCCTACGCCG GGAAGTTCTC GGGCAGGTAC GAACATCGCG TGGTCAGCGG CGGGATCGGG
CACAACCTGC CCCAGGAGGC GCCCCAGGCT TTCGCCGCCG CCGTGGCGGA ACTCGCCCGC
CTCTGA
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| Protein sequence | MSDPNKLPRR SFLEKAAIGV VTSQFAAGVP AFAQTRAASR PLKRLEPLKS IEAGVLNIGY
AELGPANGAP ILLLHGWPYD IHTYAEVAPI LASQGYRVIV PYVRGYGTTQ FISSETPRNG
QQAVLAVDII ALMDALKIQQ ATIGGCDWGA RTACILAALW PERVKALVSV SGYLIGNRES
GKAPLPPKAE LQWWYQYYFA TERGRAGYEK NRHDFSKLIW QIASPKWAFD DATFDRSAAA
LENPDHVAVV IHNYRWRLGL AEGESKYDDL ENRLAKAPVI TVPTITFEGD ANGAPHPEAS
AYAGKFSGRY EHRVVSGGIG HNLPQEAPQA FAAAVAELAR L
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