| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5363 |
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| Symbol | |
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| ID | 7975824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 67980 |
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| End bp | 71057 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795957 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002947231 |
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| Protein GI | 239820046 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0668408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG GCCGCTTCAA CCTGTCGGCG CTGGCGGTAC GCGAGCGATC CATCACGCTG
TTTCTCATCG GCCTGATCTC GCTTGCGGGG CTGGTCGCGT TCTTCAAGCT CGGCCGCGCG
GAAGACCCGG CCTTCACGAT CAAGGTGATG ACCATCATCA CGGCCTGGCC GGGCGCCACC
GCGCAGGAGA TGCAGGACCA GGTGGCCGAA AAGCTCGAGA AGCGCCTGCA GGAGCTGCGC
TACTACGACC GCGCCGAAAC CTACACGCGG CCCGGCCTCG CGTTCACCAC GCTGACCTTG
CAGGACAGCA CGCCGCCCTC CAAGGTCCAG GAAGAGTTCT ACCAGGCGCG CAAGAAGGTC
GGCGACGAAG CGGGCAGCCT GCCGGCCGGC GTGATCGGGC CGATGATCAA CGACGAGTAC
GCGGACGTCA CCTTCGCGCT GTTCGCGCTC AAGGCCAAGG GAGAAGCGCA GCGCGTGCTG
GTGCGCGATG CCGAGACGCT GCGCCAGCGC CTCTTGCACG TGCCGGGCGT GAAGAAGGTC
AACATCGCGG GCGAGCAGTC GGAGCGCATC TATGTCGAGT TCGCGCACGA CCGGCTGGCC
ACCCTGGGCA TCGGGCCGCA GGACGTGTTC GCCGCGCTCA ACGGCCAGAA CGCGCTGAGC
CCGGCCGGCT CTGTGGAAAC CCGCGGCCCG CAGGTGTTCA TCCGGCTGGA CGGCGCATTC
GACACGCTGC AGAAGATCCG CGACACGCCC CTGGTCGCGC AGGGCCGCAC CCTGAAGCTG
TCGGATGTGG CCACGGTCAG GCGCGGCTAC GAAGACCCGG CCACCTTCAT GATCCGCAAC
GGCGGCGAGC CTGCCTTGCT GATCGGCGTG GTGATGCGCG AGGGCTGGAA CGGGCTCGAC
CTGGGCAAGG CGCTGGAGGT GGAAGCCCAA GCCATCAACG CCGAGCTGCC GCTGGGCCTC
CGCCTCACCA AGGTCACGGA CCAGTCGGTG AACATCAGCG CGTCGGTCGA CGAGTTCATG
GTCAAGTTCT TTGCGGCGCT GCTGGTCGTG ATGCTCGTGA GCTTCCTCAG CATGGGCTGG
CGTGCGGGCC TGGTGGTGGC TGCCGCGGTG CCGCTGACGC TGGCCGTGGT CTTCGTGGTG
ATGGCCGCGA CCGGCAAGAA CTTCGACCGC ATCACGCTCG GCTCGCTGAT CCTCGCGCTC
GGCCTGCTGG TGGACGATGC CATCATCGCC ATCGAGATGA TGGTGGTGAA GATCGAGGAG
GGCTACAGCC ACGTGGCCGC GTCCGCCTAC GCCTGGAGCC ACACGGCGGC GCCGATGCTC
TCGGGCACGC TGGTTACCGC CGTCGGCTTC ATGCCCAACG GCTTTGCGCC GTCGACCGCG
GGCGAGTACA CGAGCAACAT GTTCTGGATC GTCGGCATTG CGCTGATCGC GTCCTGGGTG
GTCGCGGTGG TGTTCACGCC TTACCTGGGC GTCAAGCTGC TGCCCAACTT CAAGAAGATC
GAAGGCGGCC ATGCCGCGAT CTACGGCACG CCGCGCTACA ACCGGCTGCG CGGCGTGCTG
GCGCGCGTCA TCGCGCGCAA GTGGCTGGTG GCGGGCGCGG TCGTCGGCCT CTTCGTGGTG
GCCATCCTCG GCATGGGCGT GGTCAAGAAG CAGTTCTTCC CGATCTCCGA CCGCCCCGAG
GTGCTGGTCG AAGTGCAGAT GCCCTACGGC AGCTCGATCA CGCAGACCAG CGATGCCACG
GCCAAGGTCG AGGCCTGGCT GTCCACGCAG CCCGAGGCGC AGATCGTCAC GTCGTACATC
GGGCAGGGTG CGCCCCGCTT CTTTTTCGCG ATGGGGCCGG AACTGCCCGA CCCCTCGTTC
GCCAAGATCG TGGTGCGCAC GGCCAGCCAG GAGGAGCGCG AGGCGCTGAA GCACCGCTTG
CGCCAGGCCA TTGCCGATGG CCTCGCGTCC GAGGCGCGGG TGCGCGTGAC GCAGCTGGTG
TTCGGGCCGT ACTCGCCGTT CCCCGTGGCC TACCGCGTCA GCGGGCCCGA TGCGAACGAG
CTGCGCCGGA TCGCGGCCGA GGTGCGGCAG GTGATGGATG CCAGCCCGAT GATGCGCACC
GTCAGCACCG ACTGGGGCAC CCGCACGCCC ACGCTGCACT TCACCCTGAA GCAGGACCGC
CTTCAGGCCG TGGGACTGAG CTCCAGCGCG GTGGCGCAGC AACTGCAGTT CCTTCTGAGC
GGCGCGCCGG TGACCACCGT GCGCGAGGAC ATCCGCACCG TGCAGGTGGT GGCCCGTTCG
GCCGGCAGCA CCCGGCTCGA TCCCGCCAAG CTCGCGGACT TCACGCTCGC CGGTGCCGGC
GGCCAGCGCA TTCCGCTGTC GCAGGTCGGC GAGGTCGAGG TGCGCATGGA AGAGCCCGTG
ATGCGGCGGC GCGACCGCAT GCCCACGATC ACGGTGCAGG GCGACATCGC CGAGGGGCTG
CAGCCGCCGG ACGTATCGAC CGCGATCACC GCGAAGTTGC AGCCCCTGGT GCAGAAGCTG
CCGGCCGGCT ACCGCATCGC CGAGGCCGGC TCCATCGAGG AATCGGAGAA GGCGACCGCG
GCGATGCTGC CGCTGTTCCC GATCATGCTG GCGGCCACGC TGCTCATCAT CATCTTCCAG
GTGCGCTCGA TCTCCGCGAT GGTCATGGTG TTCCTCACGA GCCCGCTGGG GCTGATTGGC
GTCGTGCCGA CCTTGCTGCT GTTCCAGCAG CCCTTCGGCA TCAATGCGCT CGTGGGGCTC
ATCGCGCTGT CGGGCATCCT GATGCGCAAC ACGCTGATCC TGCTCGGGCA GATCCACCAT
AACCAGGAGG AGGGGCTCGA TCCCTTCCAT GCGGTGGTCG AGGCGACCGT GCAGCGTGCG
CGGCCCGTGA TCCTGACCGC GCTGGCGGCG ATCCTCGCGT TCATTCCGCT CACGCACTCG
GTGTTCTGGG GCGCGCTGGC GTACACGCTG ATCGGCGGCA CTTTCGCGGG GACGATCCTC
ACGCTGGTGT TCCTGCCGGC GATGTATTCG ATCTGGTTCA GGATCAAACC AGGCAGCGCC
GCCCAGCCCG CGCACTGA
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| Protein sequence | MSEGRFNLSA LAVRERSITL FLIGLISLAG LVAFFKLGRA EDPAFTIKVM TIITAWPGAT
AQEMQDQVAE KLEKRLQELR YYDRAETYTR PGLAFTTLTL QDSTPPSKVQ EEFYQARKKV
GDEAGSLPAG VIGPMINDEY ADVTFALFAL KAKGEAQRVL VRDAETLRQR LLHVPGVKKV
NIAGEQSERI YVEFAHDRLA TLGIGPQDVF AALNGQNALS PAGSVETRGP QVFIRLDGAF
DTLQKIRDTP LVAQGRTLKL SDVATVRRGY EDPATFMIRN GGEPALLIGV VMREGWNGLD
LGKALEVEAQ AINAELPLGL RLTKVTDQSV NISASVDEFM VKFFAALLVV MLVSFLSMGW
RAGLVVAAAV PLTLAVVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKIEE
GYSHVAASAY AWSHTAAPML SGTLVTAVGF MPNGFAPSTA GEYTSNMFWI VGIALIASWV
VAVVFTPYLG VKLLPNFKKI EGGHAAIYGT PRYNRLRGVL ARVIARKWLV AGAVVGLFVV
AILGMGVVKK QFFPISDRPE VLVEVQMPYG SSITQTSDAT AKVEAWLSTQ PEAQIVTSYI
GQGAPRFFFA MGPELPDPSF AKIVVRTASQ EEREALKHRL RQAIADGLAS EARVRVTQLV
FGPYSPFPVA YRVSGPDANE LRRIAAEVRQ VMDASPMMRT VSTDWGTRTP TLHFTLKQDR
LQAVGLSSSA VAQQLQFLLS GAPVTTVRED IRTVQVVARS AGSTRLDPAK LADFTLAGAG
GQRIPLSQVG EVEVRMEEPV MRRRDRMPTI TVQGDIAEGL QPPDVSTAIT AKLQPLVQKL
PAGYRIAEAG SIEESEKATA AMLPLFPIML AATLLIIIFQ VRSISAMVMV FLTSPLGLIG
VVPTLLLFQQ PFGINALVGL IALSGILMRN TLILLGQIHH NQEEGLDPFH AVVEATVQRA
RPVILTALAA ILAFIPLTHS VFWGALAYTL IGGTFAGTIL TLVFLPAMYS IWFRIKPGSA
AQPAH
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