| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5297 |
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| Symbol | |
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| ID | 7972730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5621428 |
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| End bp | 5621892 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795891 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002947165 |
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| Protein GI | 239818255 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.390031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCC AGAACCTGAG CCGCGCAATC GCGGACAACA ACAGCAGCAG CGACGCCTTC
GCGTTGACGC TCAACGTACA GCAGTGGGAA ACGCTGGCGG GCTACCTGCA GCCCATCGAC
ACCGGCGTGG GGGACGTTCT CATCGAGCAG GGCACGCACG ACCGGTCGGT GTACTTCCTG
GAGAGCGGCG CCATCAGCGT GCACCGCGTG AGCAGCAAGG AACAGATGAA GCTGGCCGTG
CTCATGCCCG GATCGGTGGT GGGCGAAGGC TCCTTCTTCT CGCGCCAGCC GCACTCCGCC
AACGTGGTGG TCACCGGCGC GGGCCGCGTG TGGCGCCTCA CGGCAATCCG TTTCGCGGAA
ATGTCGAACC GGCAGCCCAA CCTGGCCCTG GAGATTGCGA TGGGGCTCGG CGCGGTGATC
GCCAAGCGCA TGGCACACCG CTCCAAGCGC GTTGCGGTGA CCTGA
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| Protein sequence | MSIQNLSRAI ADNNSSSDAF ALTLNVQQWE TLAGYLQPID TGVGDVLIEQ GTHDRSVYFL
ESGAISVHRV SSKEQMKLAV LMPGSVVGEG SFFSRQPHSA NVVVTGAGRV WRLTAIRFAE
MSNRQPNLAL EIAMGLGAVI AKRMAHRSKR VAVT
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