| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5281 |
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| Symbol | |
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| ID | 7972714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5606344 |
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| End bp | 5607210 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795875 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947149 |
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| Protein GI | 239818239 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCCCGG CGGCGCCGGC GCCGCTGCCT TTGCCGCAGC GGGTTTCGCT GCCCACGCCG
GACGGCGAAA CGCTGCTGCT GCGCCGCCTT CCGGCGGCCG GCGCATCGCG CGGCGTCGTC
GTGCTGGTGC ATGGCCTCGG CGAGCATGCC GGGCGCTATC ACCAGCTCGC GGCGCGCCTG
CATGCATGGG GCTTCGCGGT GTGGGCCCAC GACCACCATG GCCACGGCGG ATCGTCCGGC
GCGCGCGGCG CACTGCCCGG CGAACTGCGG CTGGTCGAAG ACCTCGCGCT GGTCATCGAC
GATGCGCGCC GCGGGAACCC CGGCTTGCCG CTGCTGCTGC TCGGCCACAG CCTGGGCGGG
CTGGTCGCTG CCAGCCTGGT GGCACGCGGT GTGCGGCCGG TCGACGGCCT GGTGCTGTCT
TCGCCGGGGC TCGACCCGGG CCTGAGCGGA TTCCAGAAGG CGCTGCTCGC GGTGCTGCCG
CGCATTGCGC CCGGGCTGCG CGTCGGCAAC GGCCTGGACG ACAACTTTCT TTCGCACGAC
CGGGCCGTGG TGCAGGCCTA CCGCGACGAT CCGCTCACGC ACGACCGCAT CGGCGGCCGG
CTCGCGCGCT TTCTGGCGCA CGAAGGGGCG GTGGTGCAGC AGGCCGCGGC ACACTGGCCG
GTGCCGACCC TGCTGCTGTA TGCGGGCGAC GACCGGCTGG TGGTGCCGGC CGCGAGCCGC
GCCTTCGCGG CCGCCGCGGC GCCCGGCGGC ATGGTCGAAG CACAGTGCTT CGAATCGATG
TACCACGAGA TATTCAACGA GCTCGAGGCC GAACCCGTGT TCGCCGCGCT GCAGCGCTGG
CTCGGCAAGC GCTTTCCGCC GGACTGA
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| Protein sequence | MSPAAPAPLP LPQRVSLPTP DGETLLLRRL PAAGASRGVV VLVHGLGEHA GRYHQLAARL
HAWGFAVWAH DHHGHGGSSG ARGALPGELR LVEDLALVID DARRGNPGLP LLLLGHSLGG
LVAASLVARG VRPVDGLVLS SPGLDPGLSG FQKALLAVLP RIAPGLRVGN GLDDNFLSHD
RAVVQAYRDD PLTHDRIGGR LARFLAHEGA VVQQAAAHWP VPTLLLYAGD DRLVVPAASR
AFAAAAAPGG MVEAQCFESM YHEIFNELEA EPVFAALQRW LGKRFPPD
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