| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5230 |
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| Symbol | |
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| ID | 7969889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5551429 |
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| End bp | 5552799 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795824 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_002947098 |
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| Protein GI | 239818188 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCA GCACGCACGC AGAGAACGCC GCCAACGACA TCGCCGCGCA TCTGCACCCC
TTCACCAACC TTGCGACGCA TCCGCAGCTC GGCCCGCTGG TGATCCAGCG CGGCGACGGC
ATCTTCGTGG AGGACGACCA GGGCCGCCGC TATCTCGAGG CGATGTCGGG CCTGTGGTGC
GCCTCGCTGG GCTTCAGCAA CGCACGCCTC GCCAAGGCCG GCAGCGAAGC GCTGCACGGG
CTGCCGTACT ACCACACCTT CAACGGCCGC TCCAACCCGG CCGCCATCGC GCTGGCCGAA
AAGCTGCTCG CGCTGGCGCC GGTGCCGATG TCCAAGGTGT TCTTCGCCAA CTCGGGTTCG
GAGGCCAACG ACTCCGCGGT CAAGCTGGTC TGGTACTACC ACAACGCCAT CGGCAAGCCT
GAAAAGAAAA AGATCATCGC GCGCCGCAAT GCCTACCACG GCGTCACCGT CGCGGCCGCG
AGCCTGAGCG GCCTGGTGCC GAACCACCGC GACTTCGACC TGCCGATCGA CCGCATCCTG
CACGTCGACT GCCCGCATCA TTTCCGCTAT GCCGAAGCCG GCGAGAGCGA GCAAGACTTT
GCGACGCGGC TGGCCGCTGC GCTCGAGCAG CGCATCCTCG ACGAAGGCCC CGAGACGGTC
GGCGCCTTCA TCGCCGAGCC CGTGATGGGC GCGGGCGGCG TGCTGGTGCC GCCGGCCACC
TACTTCGACA AGGTGCAGAA GGTGCTGGCC AGGTACGAGG TGCTGCTGAT CGCCGACGAG
GTGATCTGCG GCTTCGGCCG CACCGGCCAG ATGTTCGGCT CGGCCACCTT CGGCTTGAAG
CCCGACATCC TGACCGCGGC CAAGGCGCTC TCGTCGGGCT ATGTGCCGAT CTCGGCCGTG
ATGGTCAACG AGAAGGTGCA TGCGGCCGTG GCCGCCAACA GCGGCAAGAT CGGCACCTTC
GGCCACGGCT TCACCTACTC GGGCCATCCG GTGGCTTGCG CCATTGCGCT GGAGACGCTC
AAGGTCTACG AGGACGAGAA CATCCTCGCG CACGTGCAGT CGCTGGTGCC GCAATTCCAG
CAAGGGCTGC AGAGTTACGC CGGGCGCAGG TACGTCGGCG AGGTGCGCGG CGTGGGGCTC
ATCGGCGCAA TCGAGCTGTA TGCCGACCCC GCCAGGCGCA CGCCCTTCGA TCCCGCGCAG
AAGGCCGGCG CGCGCCTTGC CGAGCTTGCG CTGGCGCAGG GGCTCATCGT GCGCGCCATG
GGCGATTCCG TCGCCTTCTG CCCGCCGCTC ATCATCACGG CCGAACAGAT CGACGACATG
TTCGCGCGCT TCGCCCGCGC GATGGCGATC TTCGAAGAAA GCTTCGCGTG A
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| Protein sequence | MNASTHAENA ANDIAAHLHP FTNLATHPQL GPLVIQRGDG IFVEDDQGRR YLEAMSGLWC
ASLGFSNARL AKAGSEALHG LPYYHTFNGR SNPAAIALAE KLLALAPVPM SKVFFANSGS
EANDSAVKLV WYYHNAIGKP EKKKIIARRN AYHGVTVAAA SLSGLVPNHR DFDLPIDRIL
HVDCPHHFRY AEAGESEQDF ATRLAAALEQ RILDEGPETV GAFIAEPVMG AGGVLVPPAT
YFDKVQKVLA RYEVLLIADE VICGFGRTGQ MFGSATFGLK PDILTAAKAL SSGYVPISAV
MVNEKVHAAV AANSGKIGTF GHGFTYSGHP VACAIALETL KVYEDENILA HVQSLVPQFQ
QGLQSYAGRR YVGEVRGVGL IGAIELYADP ARRTPFDPAQ KAGARLAELA LAQGLIVRAM
GDSVAFCPPL IITAEQIDDM FARFARAMAI FEESFA
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