Gene Vapar_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5098 
Symbol 
ID7971469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5410346 
End bp5410855 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID644795692 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002946966 
Protein GI239818056 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAA CAAAGTTGCG TACCACGCCG GCGCAGGCGG CCGAAGCGGC AGCGGAGCTC 
GACCGCACCG ATCGCGCCAT CCTGCGGGCC CTGCAGCGCG ACGCCTCGGT GTCCAACGTG 
GCGCTGGCCG CCAAGGTCAA CCTGAGCGCG CCGGCCTGCC TGCGCCGCGT GGAGCGGCTC 
AAGGCCGCGG GGCTCGTCAA GGGCATCGTG GCGCTGCTCG ACGCCCAGGC GCTGGAGCTC 
GGCATGCTGG TGATGATCGG CGTGGTGCTC GACCGCTCCA CGCCCGATTC CTTCGCCGAT 
TTCGAGAAGG CCGCGCAAAA AGTCTCGGGC TGCCTCGAAT GCCACGTGGT CACGGGCGAG 
TTCGACTACT TCATGCTCGT GCGAACGCGC GACAACGACA GCTTCAACCG CCTGCATGCC 
GAGCAGCTGC TGTACCTGCC GGGCGTGCGG CAGATCCGGA CCTTCGTGGT GCTCAAGCAG 
GTGCTGTCGA CCACGCAGCT GCCCATCTAG
 
Protein sequence
MSTTKLRTTP AQAAEAAAEL DRTDRAILRA LQRDASVSNV ALAAKVNLSA PACLRRVERL 
KAAGLVKGIV ALLDAQALEL GMLVMIGVVL DRSTPDSFAD FEKAAQKVSG CLECHVVTGE 
FDYFMLVRTR DNDSFNRLHA EQLLYLPGVR QIRTFVVLKQ VLSTTQLPI