Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5078 |
Symbol | |
ID | 7974197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5390855 |
End bp | 5391361 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795672 |
Product | YiaAB two helix domain protein |
Protein accession | YP_002946946 |
Protein GI | 239818036 |
COG category | [S] Function unknown |
COG ID | [COG4298] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACCT TCCCTTCCAC CACCGTTTCG ATCCAGCGCG ACACGCGGGC CTGGCAGTTC CAGGTCTGGG CTTCGTTCGC GGCCGCCGTG TTCCTGTGCG CCACCGGCCT GAGCTGGCTG CCGGGCGAGG CGCTGGACCG TGCGTTCATG GTGATGGGCT ATGTGTTCTG CCTGAGCACC GCCTTCATGC TGGCCAAGTT CGTGCGCGAC AGCCAGCAGG CAGGCGCCGG CGGCACGGCA GCGAGCCGCG ACGTGCCGAT GTGGCGCCTG GTGGTCTGGG GCAGCTTCTT CACCGCGATG GGCCTGACCG GCTGGGGCCT GGTCCGCATG GAGATCAACG ACGCCTACAA GGCCTTCCTC GGTGTGAGCT GGCTGTTCCT GATCAGCTCG GCCTTCACGC TGGCCAAGAC GCTGCGCGAC CGCCACGAAG CCGACCTGAT CGAGGCGCGC CTGCAGGGCC GCCGCGCCGC CCGCCAGGAA GCCGCTGCCG CCGGCTCGGC CGAATGA
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Protein sequence | MQTFPSTTVS IQRDTRAWQF QVWASFAAAV FLCATGLSWL PGEALDRAFM VMGYVFCLST AFMLAKFVRD SQQAGAGGTA ASRDVPMWRL VVWGSFFTAM GLTGWGLVRM EINDAYKAFL GVSWLFLISS AFTLAKTLRD RHEADLIEAR LQGRRAARQE AAAAGSAE
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