Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4969 |
Symbol | |
ID | 7974251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5279940 |
End bp | 5280974 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795564 |
Product | serine/threonine protein kinase |
Protein accession | YP_002946839 |
Protein GI | 239817929 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.39846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTTT CCCCCGCAGC GCCCGCGAAT ACCCATCCTT ACGAGAGCCT CACGCCCGAC GTGGTGCTCG ACGCCCTGGC GACGCTCGGC CTGCACGGCG ACGGCCGGCT CACGGGCCTG AACTCCTATG AGAACCGGGT CTACCAGGTC TACCTGGAAG ACCGCAGTGC CGTGGTCGTC AAGTTCTACC GCCCCGAGCG CTGGAGCGAA GCCGAGATCC TCGAGGAGCA CGGCTTCTCG CTCGAACTGG CGGCGGCCGA AGTGCCCGCC GTGGCGCCGC TGGCCTTCGA CGGCAGCACG CTGCACCGCC ACGGCGGCTT CGCCTTCAGC GTGAGCCCCT ACCGCGGCGG CCGCGCGCCG GAGCTCGACG ATTTCGAGGT GCTCGAGTGG GTCGGCCGCT TTCTCGCGCG CATCCACACC GTGGGCAGCG CCAGGCCCTT CGAGGCCCGG CCCGCGCTCG ACCTGCAGAC CTTCGGCATC GCCTCGCGCG ACTGGCTGCT GGCCAACGAC AAGGTGCCGC TCGACGTGCA GCGCGACTGG GAAAAGGCCT GCAACGAAGC ACTGGACATG ATTGCCGCCA CGGCGCTGGC GGTGAACGCC CCGGCCTCCG ACTTCAAGCC GCGCAAGCTG CGCCTGCACG GCGACGTGCA TCCCGGCAAC ATCCTGTGGA CCCCGACCGA CCGGCCCGGC GGCGGCCCGC ACTTCGTCGA CCTGGACGAT GCGCGCACCG GCTTCGCGGT GCAGGACTTG TGGATGCTGC TGTCGGGCGA ACGTGCGCAG CGCACCTCGC AGCTCTCGGG GCTGCTCGAC GGCTACGAGC AGTTCCGCGA ATTCGACCGC CGCGAACTCG CGCTGATCGA GCCGCTGCGC ACCCTGCGGC TCATCCACTA CAGCGCCTGG CTCGCGCGGC GCTGGGAAGA CCCGATCTTC CCGATCAACT TTCCGTGGTT CGGCTCCAGC GACTACTGGA AGGGCCAGAT CCTCGTGCTG CAGGAGCAAT GCGAGCAGAT GGCCGAAGAG CCGCTCTACG CTTAG
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Protein sequence | MTLSPAAPAN THPYESLTPD VVLDALATLG LHGDGRLTGL NSYENRVYQV YLEDRSAVVV KFYRPERWSE AEILEEHGFS LELAAAEVPA VAPLAFDGST LHRHGGFAFS VSPYRGGRAP ELDDFEVLEW VGRFLARIHT VGSARPFEAR PALDLQTFGI ASRDWLLAND KVPLDVQRDW EKACNEALDM IAATALAVNA PASDFKPRKL RLHGDVHPGN ILWTPTDRPG GGPHFVDLDD ARTGFAVQDL WMLLSGERAQ RTSQLSGLLD GYEQFREFDR RELALIEPLR TLRLIHYSAW LARRWEDPIF PINFPWFGSS DYWKGQILVL QEQCEQMAEE PLYA
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