| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4896 |
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| Symbol | |
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| ID | 7971590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5211491 |
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| End bp | 5213287 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795491 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_002946766 |
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| Protein GI | 239817856 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCG CAGTCCACGG CCTCCCCGTC GCCCGTGGCA TTGCCATTGG CCGCGCGGTG
CTGGTGGTGT CCAGCCGCAT CGACGTGGCC CACTACTTCA TCAAGCCCGA GGAAGTGGAG
ACCGAGATCG ACCGGGTGCG CATGGCCCGC AATGCGGTGG CCGACGAGCT TGCCAAGCTG
CAGGCCAGCG TCGCGCTGAT GGGCCCCAAC GATGCGCCGC ACGAGCTCGC CGCGCTGCTC
GAGGTGCACC AGATGCTGCT GCAGGACGAG GCGCTCACCG GCGGCGTCAA GCACTGGATC
ACCGACCGGC TCTACAACGC CGAGTGGGCG CTGACCACGC AGCTCGAAAT CATCGCGCGC
CAGTTCGACG AGATGGAGGA CGAGTACCTG CGCGAGCGCA AGGCCGACCT CGAGCAGGTG
GTCGAGCGGC TGCTGCACCG CATGAAGGGC ACGGCCGCGG TGCTGGCGCC GAGCCCGCCG
CGCCGCAAGC GCCCCGCGGC CGAGGAAGAC GACGACCCCA CCGCCGGCGA CGGCATCGAC
GCGCCGCTGG TGCTGATCGC GCATGACCTG TCGCCGGCCG ACATGCTCCA GTTCAAGAAG
AGCGTGTTCG CCGGCTTCGT GACCGACGTG GGCGGGCGCA CCTCGCACAC CGCGATCGTC
GCGCGCAGCA TGGACATTCC GGCCGTGGTG GGCGCGCGCA CCGCGAGCCA GCTGGTGCGC
CAGGACGACT GGGTGATCAT CGACGGCGAT GCCGGCGTGG TGATCGTCGA TCCCTCGCCG
ATCATCCTGG CCGAGTACGG CTTCAAGCAG CGCCAGGGCG ACCTGGAGCG CGGCCGGCTC
GCACGCCTGC GCCACAAGCC CGCGGTGACG CTCGACGGCC AGCGCGTCGA GTTGCTCGCC
AACATCGAGA TGCCCGAGGA CACCGTGGGT GCCGTCAAGG CCGGCGCAGT GGGCGTCGGG
CTGTTCCGCA GCGAGTTCCT CTTCATGGGC CGCGAGTCGC AGCACCAGAC CCGCCTGCCC
GACGAGGAAG AGCAATACCA GGCCTACAAG CGCGCGGTCG AAGGCATGCA GGGCATGCCG
GTCACCATCC GCACCATCGA CGTGGGCGCC GACAAGCCGC TCGACGGCAA GGCCGTCAGC
AAGCAGGAGC ACCTGAATCC CGCGCTCGGC CTGCGCGCCA TCCGCTGGAG CCTGGCCGAC
CCGGCGATGT TCCTCACGCA GCTGCGCGCG ATCCTGCGCG CGGCGGCGCA CGGCGAGATC
CACCTGCTGA TTCCCATGCT CGCGCACGTC AGCGAGATCC GCCAGACGCT GTCGCTGATC
GACTTCGCGC GCTCGGAGCT CGACAGCCGC GGCGCCGTGT ACGGCAAGGT GAAGCTCGGC
GCGATGATCG AGATTCCCGC CGCCGCGCTC ACGCTCAAGA CCTTCCTGAA GTACTTCGAC
TTCCTGTCGA TCGGCACCAA CGACCTGATC CAGTACACGC TGGCCATCGA CCGCGCCGAC
GAGGCCGTGG CCCACCTCTA CGACCCGGCC CATCCCGCAG TGCTCCGGCT GGTGGCCGAC
ACCATTGCCG AATGCCGCCG CCAGGGCAAG AGCGTGGCCG TGTGCGGCGA GATGGCGGGC
GACGTGGCCT TCACGCGCCT CTTGCTCGGC CTCGGACTGC GCAGCTTCTC GATGCATCCG
TCGCGCATCC TCGCCGTCAA GCAGGAGGTG CTGCGCGCGG ACACCGGCAA GCTCGAGGAA
TGGGCCAAGG GCGTGCTCGA GTCGGACGAT CCGGCGTCGG TGCTGGCCGG AAATTAG
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| Protein sequence | MTFAVHGLPV ARGIAIGRAV LVVSSRIDVA HYFIKPEEVE TEIDRVRMAR NAVADELAKL
QASVALMGPN DAPHELAALL EVHQMLLQDE ALTGGVKHWI TDRLYNAEWA LTTQLEIIAR
QFDEMEDEYL RERKADLEQV VERLLHRMKG TAAVLAPSPP RRKRPAAEED DDPTAGDGID
APLVLIAHDL SPADMLQFKK SVFAGFVTDV GGRTSHTAIV ARSMDIPAVV GARTASQLVR
QDDWVIIDGD AGVVIVDPSP IILAEYGFKQ RQGDLERGRL ARLRHKPAVT LDGQRVELLA
NIEMPEDTVG AVKAGAVGVG LFRSEFLFMG RESQHQTRLP DEEEQYQAYK RAVEGMQGMP
VTIRTIDVGA DKPLDGKAVS KQEHLNPALG LRAIRWSLAD PAMFLTQLRA ILRAAAHGEI
HLLIPMLAHV SEIRQTLSLI DFARSELDSR GAVYGKVKLG AMIEIPAAAL TLKTFLKYFD
FLSIGTNDLI QYTLAIDRAD EAVAHLYDPA HPAVLRLVAD TIAECRRQGK SVAVCGEMAG
DVAFTRLLLG LGLRSFSMHP SRILAVKQEV LRADTGKLEE WAKGVLESDD PASVLAGN
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